| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,567,128:1 | +C | 8.7% | coding (843/879 nt) | PP_2250 ← | LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,567,128 | 1 | . | C | 8.7% | 264.9 / 19.0 | 69 | coding (843/879 nt) | PP_2250 | LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base . (33/30); new base C (3/3); total (36/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.57e-01 | |||||||||||
GGCGCAGCGCGCTCATGACGCGGTGCGGGGCCTATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGACCCGCGACAACGGCAGATCTCCCCAGCCCAA > NC_002947/2566979‑2567274 | ggCGCAGCGCGCTCATGACGCGGTGCGGGGCCTATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCa < 2:1233721/150‑1 (MQ=255) gcAGCGCGCTCATGACGCGGTGCGGGGCCTATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑Gcc > 1:771945/1‑150 (MQ=255) gcAGCGCGCTCATGACGCGGTGCGGGGCCTATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑Gcc > 1:1249665/1‑150 (MQ=255) gcgcgcTCATGACGCGGTGCGGGGCCTATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCctgc > 1:1019953/1‑150 (MQ=255) cgcTCATGACGCGGTGCGGGGCCTATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGC‑TGCACGCctgctga < 1:532807/150‑2 (MQ=255) cTCATGACGCGGTGCGGGGCCTATCGACCGAGATATCGGCTTGAGGGGTAAAAGAATGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACAGCAGTCAAGGATCAGCCAGCTGCTCCACCAGCAGGCGTGCA‑GCCTGCTGCAg > 1:1295356/1‑150 (MQ=255) aTGACGCGGTGCGGGGCCGATAGACCGAGAGATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCgg < 2:408626/150‑1 (MQ=255) gACGCGGTGCGGGGCCTATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCt > 1:510052/1‑150 (MQ=255) tATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTATTGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAg > 2:486135/1‑150 (MQ=255) tATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAg > 2:1010406/1‑150 (MQ=255) aCCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCAGGCATCACCCAGCTGCTCGATCAGCAAGCGTGCA‑GCCTGCTGCAGCGGCCGGTTTTTGCGCCACAGGatat > 1:25338/1‑150 (MQ=255) cGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAg < 1:439166/122‑1 (MQ=255) cGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAg > 2:439166/1‑122 (MQ=255) cGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGc > 1:1347691/1‑150 (MQ=255) cGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGC‑TGCACGCctgc > 2:235261/1‑117 (MQ=255) cGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGC‑TGCACGCctgc < 1:235261/117‑1 (MQ=255) gagaTATCGGCTTTAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGTTGCTCGATTTGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCa < 2:140168/150‑1 (MQ=255) atatCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACgg < 2:97669/150‑1 (MQ=255) atCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGc > 1:67886/1‑150 (MQ=255) tCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTgcgc < 1:1066763/131‑1 (MQ=255) tCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTgcgc > 2:1066763/1‑131 (MQ=255) ggCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGTAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGt > 1:75989/1‑150 (MQ=255) gCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGtt < 1:217965/150‑1 (MQ=255) ttGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGat > 1:1183915/1‑134 (MQ=255) ttGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGat < 2:1183915/134‑1 (MQ=255) ggggTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGTAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAAtt < 2:75989/150‑1 (MQ=255) tAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGtt < 2:510052/150‑1 (MQ=255) aaaGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGc < 2:1211759/150‑1 (MQ=255) aaaGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGc > 1:1211759/1‑150 (MQ=255) aGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCgt < 1:1010406/150‑1 (MQ=255) gATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCgtg > 2:1191813/1‑150 (MQ=255) cTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGaa < 1:1191813/150‑1 (MQ=255) ttAGGGAAAATTATTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAAt > 2:1086881/1‑150 (MQ=255) aGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGC‑TGCACGCctgctgat < 1:10994/83‑3 (MQ=38) aGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGC‑TGCACGCctgctgat > 2:10994/1‑81 (MQ=38) gAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAg > 2:31127/1‑150 (MQ=255) ccggtggcAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGgcgc < 1:1174645/143‑1 (MQ=255) aGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACg > 1:376769/1‑129 (MQ=255) aGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACg < 2:376769/129‑1 (MQ=255) ttCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCt < 2:771945/150‑1 (MQ=255) gacggacgGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCgt < 2:1155906/112‑1 (MQ=255) gacggacgGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGc > 1:41351/1‑150 (MQ=255) gacggacgGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAAGGCGTTGCgt > 1:1155906/1‑112 (MQ=255) ggacggCAGTCAGGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTTCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCcag > 2:282959/1‑150 (MQ=255) gacggCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCcagc > 2:281259/1‑150 (MQ=255) acggCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGc < 1:961899/83‑1 (MQ=255) acggCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGc > 2:961899/1‑83 (MQ=255) acggCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCca > 2:383319/1‑147 (MQ=255) acggCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCca < 1:383319/147‑1 (MQ=255) acggCAGTCACGGATCAGCCAGCTGCGCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATCTGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCGAGGCGCACCAGACGCCCGCTGGCcagca > 1:431868/1‑150 (MQ=255) cAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGCATTCCAGGCGCACCAGACGCCCGCTGGCCagcagcat < 2:1019953/150‑3 (MQ=255) aGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCggg < 2:67886/150‑1 (MQ=255) tCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGc > 2:773836/1‑150 (MQ=255) tCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGc > 1:407966/1‑150 (MQ=255) tCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGc > 2:323299/1‑150 (MQ=255) aCGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGa < 2:1249665/150‑1 (MQ=255) gATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGAccc < 1:31127/150‑1 (MQ=255) tCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGACCcgc < 1:773836/150‑1 (MQ=255) gcctgcTGATCGAGCAGCTGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGACCCGCGAc > 2:591505/1‑150 (MQ=255) gctgctCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGaa < 2:1190799/97‑1 (MQ=255) gctgctCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGaa > 1:1190799/1‑97 (MQ=255) gctCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAg < 2:1076397/100‑1 (MQ=255) gctCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAg > 1:1076397/1‑100 (MQ=255) tCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTa > 1:752639/1‑87 (MQ=255) tCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTa < 2:752639/87‑1 (MQ=255) cGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGACCCGCGACAACGGCAGAt < 1:281259/150‑1 (MQ=255) cGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGACCCGCGACAACGGCAGAt < 1:323299/150‑1 (MQ=255) gcagcagGC‑TGCACGCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGACCCGCGACAACGGCAGAtctc > 2:1282444/2‑150 (MQ=255) agcagGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGACCCGCGACAACGGCAGATCTccc < 2:1120944/150‑1 (MQ=255) tGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGACCCGCGACAACGGCAGATCTCCCCAGCCCaa < 1:1086881/150‑1 (MQ=255) | GGCGCAGCGCGCTCATGACGCGGTGCGGGGCCTATCGACCGAGATATCGGCTTGAGGGGTAAAAGATTGAAGTGCTTAGGGAAAATTCTTACAGACGTTTCGACGGACGGCAGTCACGGATCAGCCAGCTGCTCGATCAGCAGGCGTGCA‑GCCTGCTGCAGCGGCTGTTGTTTGCGCCACAGGATATGCACGGGCAGTTGCAATTCGTTGCGTGTATTACGGAATTCCAGGCGCACCAGACGCCCGCTGGCCAGCAGCGGGGCGACCCGCGACAACGGCAGATCTCCCCAGCCCAA > NC_002947/2566979‑2567274 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |