| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 133223 = | 45 (0.860) | 5 (0.100) | 4/236 | NT | 9.8% | coding (1/855 nt) | PP_0128 | hypothetical protein |
| ? | NC_002947 | 133252 = | 49 (0.970) | coding (30/855 nt) | PP_0128 | hypothetical protein | |||||
AATGGCGGTAGCGCTCGGTGCTGATGCCCACCTGGATGTTGAAACTGAGCAGCCGCAGACGGCCATCCTCGGGCAGGCCCGGGGCCTGCAGGTGATGCTCGTTGACCTGCGGCTCGTGCAGGCCAATGCCACGCGT‑AGCTCTGAAGCGGGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/133376‑133223‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcatTGGCCTGCACGAGCCGCAGGTCAACGAGCATCACCTGCAGGCCCCGGGCCTGCCCGAGGATGGCCGTCTGCGGCTGCTCAGTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGACGCGTAGCTGGCAGCACC > NC_002947/133252‑133400 AATGGCGGTAGCGCTCGGTGCTGATGCCCACCTGGATGTTGAAACTGAGCAGCCGCAGACGGCCATCCTCGGGCAGGCCCGGGGCCTGCAGGTGATGCTCGTTGACCTGCGGCTCGTGCAGGCCAATGCCACGCGT‑AGCTCTGAAGCGGG < 1:777236/150‑1AATGGCGGTAGCGCTCGGTGCTGATGCCCACCTGGATGTTGAAACTGAGCAGCCGCAGACGGCCATCCTCGGGCAGGCCCGGGGCCTGCAGGTGATGCTCGTTGACCTGCGGCTCGTGCAGGCCAATGCCACGCGT‑AGCTCTGAAGCGGG < 2:686752/150‑1AATGGCGGTAGCGCTCGGTGCTGATGCCCACCTGGATGTTGAAACTGAGCAGCCGCAGACGGCCATCCTCGGGCAGGCCCGGGGCCTGCAGGTGATGCTCGTTGACCTGCGGCTCGTGCAGGCCAATGCCACGCGT‑AGCTCTGAAGCGGG < 2:981656/150‑1 GATGCCCACCTGGATGTTGAAACTGAGCAGCCGCAGACGGCCATCCTCGGGCAGGCCCGGGGCCTGCAGGTGATGCTCGTTGACCTGCGGCTCGTGCAGGCCAATGCCCCGCTTCAGAGCT‑ACGCGTGGCATTGGCCTGCACGA > 1:189936/1‑144 GATGCCCACCTGGATGTTGAAACTGAGCAGCCGCAGACGGCCATCCTCGGGCAGGCCCGGGGCCTGCAGGTGATGCTCGTTGACCTGCGGCTCGTGCAGGCCAATGCCCCGCTTCAGAGCT‑ACGCGTGGCATTGGCCTGCACGA < 2:189936/144‑1 ccgATGCCACGCGT‑AGCTCTGAAGCGGGGCATGGGCCTGCACGAGCCGCAGGTCAACGAGCATCACCTGCAGGCCCCGGGCCTGCCCGAGGATGGCCGTCTGCGGCTGCTCAGTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTAC > 1:1334984/4‑150 AATGCCACGCGT‑AGCTCTGAAGCGGGGCATTGGCCTGCACGAGCCGCAGGTCAACGAGCATCACCTGCAGGCCCCGGGCCTGCCCGAGGATGGCCGT > 1:1322134/1‑97 AATGCCACGCGT‑AGCTCTGAAGCGGGGCATTGGCCTGCACGAGCCGCAGGTCAACGAGCATCACCTGCAGGCCCCGGGCCTGCCCGAGGATGGCCGT < 2:1322134/97‑1 GCATTGGCCTGCACGAGCCGCAGGTCAACGAGCATCACCTGCAGGCCCCGGGCCTGCCCGAGGATGGCCGTCTGCGGCTGCTCAGTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGACGCGTAGCTGGCAGC > 2:1239701/1‑150 ATTGGCCTGCACGAGCCGCAGGTCAACGAGCATCACCTGCAGGCCCCGGGCCTGCCCGAGGATGGCCGTCTGCGGCTGCTCAGTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGACGCGTAGCTGGCAGCAC < 1:1190298/150‑1 TTGACCTGCACGAGCCGCAGGTCAACGAGCATCACCTGCAGGCCCCGGGCCTGCCCGAGGATGGCCGTCTGCGGCTGCTCAGTTTCAACAACCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGACGCGTAGCTGGCAGCACC > 2:271062/1‑150 AATGGCGGTAGCGCTCGGTGCTGATGCCCACCTGGATGTTGAAACTGAGCAGCCGCAGACGGCCATCCTCGGGCAGGCCCGGGGCCTGCAGGTGATGCTCGTTGACCTGCGGCTCGTGCAGGCCAATGCCACGCGT‑AGCTCTGAAGCGGGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/133376‑133223‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcatTGGCCTGCACGAGCCGCAGGTCAACGAGCATCACCTGCAGGCCCCGGGCCTGCCCGAGGATGGCCGTCTGCGGCTGCTCAGTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGACGCGTAGCTGGCAGCACC > NC_002947/133252‑133400 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |