| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 146277 = | 61 (1.160) | 4 (0.080) | 4/234 | NT | 6.7% | coding (35/1230 nt) | PP_0138 | membrane protein |
| ? | NC_002947 | 146295 = | 53 (1.060) | coding (53/1230 nt) | PP_0138 | membrane protein | |||||
TTCAGAAAGCCCAGCCACAGGGTCAGTGTGCCGAACAGCAGCACCATCACCTCGACCGACAGCTTGGCCATGGCGAAGATGCTTTCGACCATTGCCGCGAAGATGCCTGCGTTGCCACCCACCAGCCATTGGGCCATGGCGGACACCG‑CCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/146430‑146277‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccaTGGCCCAATGGCTGGTGGGTGGCAACGCAGGCATCTTCGCGGCAATGGTCGAAAGCATCTTCGCCATGGCCAAGCTGTCGGTCGAGGTGATGGTGCTGCTGTTCGGCACACTGACCCTGTGGCTGGGCTTTCTGAAGATCGCCGAGAAG > NC_002947/146295‑146443 TTCAGAAAGCCCAGCCACAGGGTCAGTGTGCCGAACAGCAGCACCATCACCTCGACCGACAGCTTGGCCATGGCGAAGATGCTTTCGACCATTGCCGCGAAGATGCCTGCGTTGCCACCCACCAGCCATTGGGCCATGGCGGACACCG‑CC > 1:440773/1‑150 GAAAGCCCAGCCACAGGGTCAGTGTGCCGAACAGCAGCACCATCACCTCGACCGACAGCTTGGCCATGGCGAAGATGCTTTCGACCATTGCCGCGAAGATGCCTGCGTTGCCACCCACCAGCCATTGGGCCATGGCGGACACCG‑CCGCCA > 2:488615/1‑150 AGTGTGCCGAACAGCAGCACCATCACCTCGACCGACAGCTTGGCCATGGCGAAGATGCTTTCGACCATTGCCGCGAAGATGCCTGCGTTGCCACCCACCAGCCATTGGGCCATGGCGG‑CGGTGTCCGCCATGGCCCAATGGCTGGTGGGT < 2:775409/150‑1 TTTCGACCATTGCCGCGAAGATGCCTGCGTTGCCACCCACCAGCCATTGGGCCATGGCGG‑CGGTGTCCGCCATGGCCCAATGGCTGGT > 1:804280/1‑88 TTTCGACCATTGCCGCGAAGATGCCTGCGTTGCCACCCACCAGCCATTGGGCCATGGCGG‑CGGTGTCCGCCATGGCCCAATGGCTGGT < 2:804280/88‑1 CCATGGCGAACACCG‑CCGCCATGGCCCAATGGCTGGTGGGTGGCACCGCAGGCATCTTCGCGGCAATAGTCGAACGCCTCTTCGCCATGGCCAAGCTGTCGGGCGATCAGATGGTGCTGCTCTTCGGCACACTGACCCGGTTGCTGTGCT > 2:402227/1‑150 CGCCATGGCCCAATGGCTGGTGGGTGGCAACGCAGGCATCTTCGCGGCAATGGTCGAAAGCATCTTCGCCATGGCCAAGCTGTCGGTCGAGGTGATGGTGCTGCTGTTCGGCACACTGACCCTGTGGCTGGGCTTTCTGAAGATCGCCGA < 1:775409/150‑1 GCCATGGCCCAATGGCTGGTGGGTGGCAACGCAGGCATCTTCGCGGCAATGGTCGAAAGCATCTTCGCCATGGCCAAGCTGTCGGTCGAGGGGATGGTGCTGCTGTTCGGCACACTGACCCTGTGGCTGGGCTTTCTGAAGATCGCCGAG > 2:1334593/1‑150 CCATGGCCCAATGGCTGGTGGGTGGCAACGCAGGCATCTTCGCGGCAATGGTCGAAAGCATCTTCGCCATGGCCAAGCTGTCGGTCGAGGTGATGGTGCTGCTGTTCGGNACACTGACCCTGNGGCTGGGCTTTCTGAAGATCGCCGAGA < 1:1414839/150‑1 CATGGCCCAATGGCTGGTGGGTGGAAACGCAGGCATCTTCGCGGCAATGGTCGAAAGCATCTTCGCCATGGCCAAGCTGTCGGTCGAGGTTATGGTGCTGCTGTTCGGCACACTGACCCTGTGGCTGGGCTTTCTGAAGATCGCCGAGAA < 2:698436/150‑1 ATGGCCCAATGGCTGGTGGGTGGCAACGCAGGCATCTTCGCGGCAATGGTCGAAAGCATCTTCGCCATGGCCAAGCTGTCGGTCGAGGTGATGGTGCTGCCGTTCGGCACACTGACCCTGTGGCTGGGCTTTCTGAAGATCGCCGAGAAG < 2:1169590/150‑1 TTCAGAAAGCCCAGCCACAGGGTCAGTGTGCCGAACAGCAGCACCATCACCTCGACCGACAGCTTGGCCATGGCGAAGATGCTTTCGACCATTGCCGCGAAGATGCCTGCGTTGCCACCCACCAGCCATTGGGCCATGGCGGACACCG‑CCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/146430‑146277‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccaTGGCCCAATGGCTGGTGGGTGGCAACGCAGGCATCTTCGCGGCAATGGTCGAAAGCATCTTCGCCATGGCCAAGCTGTCGGTCGAGGTGATGGTGCTGCTGTTCGGCACACTGACCCTGTGGCTGGGCTTTCTGAAGATCGCCGAGAAG > NC_002947/146295‑146443 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |