New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 298452	58 (1.100)	5 (0.100)	5/236	NT	7.7%	coding (90/384 nt)	PP_0244	hypothetical protein
	?	NC_002947	= 298489	64 (1.270)					coding (53/384 nt)	PP_0244	hypothetical protein

GTTGATCTTGCACTCGATGGTGACGCTTTGCTGGTCAAAGCCATGGCTGGCCGAGCAGGCCAGGCCCATGGCGATGTCCACCAGGCTGAAGATCGCCCCGCCGTGCAGCTTCTGGCCACGGTTGCGCAACTGGGGCTCGAGCGCCAGGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/298302‑298452 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggctGCCGCCTGCAACACCTGGACAGCGGTGTTGCCGAGGTAGCCCTGGCGCTCGAGCCCCAGTTGCGCAACCGTGGCCAGAAGCTGCACGGCGGGGCGATCTTCAGCCTGGTGGACATCGCCATGGGCCTGGCCTGCTCGGCCAGCCAT  <  NC_002947/298489‑298344                                                                                                                                                                                                                                                                                                           GTTGATCTTGCACTCGATGGTGACGCTTTGCTGGTCAAAGCCATGGCTGGCCGAGCAGGCCAGGCCCATGGCGATGTCCACCAGGCTGAAGATCGCCCCGCCGTGCAGCTTCTGGCCACGGTTGCGCAACTGGGGCTCGAGCGCCAGGGC                                                                                                                                                     >  2:1340461/1‑150  TTGATCTTGCACTCGATGGTGACGCTTTGCTGGTCAAAGCCATGGCTGGCCGAGCAGGCCAGGCCCATGGCGATGTCCACCAGGCTGAAGATCGCCCCGCCGTGCAGCTTCTGGCCACGGTTGCGCAACTGGGGCTCGAGCGCCAGGGCT                                                                                                                                                    <  1:986441/150‑1                        CGCTTTGCTGGTCAAAGCCATGGCTGGCCGAGCAGGCCAGGCCCATGGCGATGTCCACCAGGCTGAAGATCGCCCCGCCGTGCAGCTTCTGGCCACGGTTGCGCAACTGGGGCTCGAGCGCCAGGGCTGCCGCCTGCAACACCTGGACAG                                                                                                                              >  1:843848/1‑150                                   TCAAAGCCATGGCTGGCCGAGCAGGCCAGGCCCATGGCGATGTCCACCAGGCTGAAGATCGCCCCGCCGTGCAGCTTCTGGCCACGGTTGCGCAACTGGGGCTCGAGCGCCAGGGCTACC‑TCTGCAACACCTGGACAGCGGTGTTGCCGA                                                                                                                  <  2:998120/150‑1                                     AAAGCCATGGCTGGCCGAGCAGGCCAGGCCCATGGCGATGTCCACCAGGCTGAAGATCGCCCCGCCGTGCAGCTTCTGGCCACGGTTGCGCAACTGGGGCTCGAGCGCCAGGGCTGCCGCCTGCAACACCTGGACAGCGGTGTTGCCGAG                                                                                                                 <  2:843848/150‑1                                                                             TCCACCAGGCTGAAGATCGCCCCGCCGTGCAGCTTCTGGCCACGGTTGCGCAACTGGGGCTCGAGCGCCAGGGCTGCCGCCTGCAACACCTGGACAGCGGTGTTGCCGAGGTAGCCCTGG                                                                                                       >  1:1044531/1‑120                                                                             TCCACCAGGCTGAAGATCGCCCCGCCGTGCAGCTTCTGGCCACGGTTGCGCAACTGGGGCTCGAGCGCCAGGGCTGCCGCCTGCAACACCTGGACAGCGGTGTTGCCGAGGTAGCCCTGG                                                                                                       <  2:1044531/120‑1                                                                                                                                                    GGCTGCCGCCTGCAACACCTGGACAGCGGTGTTGCCGAGGTAGCCCTGGCGCTCGAGCCCCAGTTGCGCAACCGTGGCCAGAAGCTGCACGGCGGGGCGATCTTCAGCCTGGTGGACATCGCCATGGGCCTGGCCTGCTCGGCCAGCCAT  <  1:1194480/150‑1                                                                                                                                                      CTGCCGCCTGCAACACCTGGACAGCGGTGTTGCCGAGGTAGCCCTGGCGCTCGAGCCCCAGTTGCGCAACCGTGGCCAGAAGCTGCACGGCGGGGCGATCTTCAGCCTGGTGGACATCGCCATGGGCCTGGCCTGC              <  1:423656/136‑1                                                                                                                                                      CTGCCGCCTGCAACACCTGGACAGCGGTGTTGCCGAGGTAGCCCTGGCGCTCGAGCCCCAGTTGCGCAACCGTGGCCAGAAGCTGCACGGCGGGGCGATCTTCAGCCTGGTGGACATCGCCATGGGCCTGGCCTGC              >  2:423656/1‑136                                                                                                                                                                                                                                                                                                           GTTGATCTTGCACTCGATGGTGACGCTTTGCTGGTCAAAGCCATGGCTGGCCGAGCAGGCCAGGCCCATGGCGATGTCCACCAGGCTGAAGATCGCCCCGCCGTGCAGCTTCTGGCCACGGTTGCGCAACTGGGGCTCGAGCGCCAGGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/298302‑298452 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggctGCCGCCTGCAACACCTGGACAGCGGTGTTGCCGAGGTAGCCCTGGCGCTCGAGCCCCAGTTGCGCAACCGTGGCCAGAAGCTGCACGGCGGGGCGATCTTCAGCCTGGTGGACATCGCCATGGGCCTGGCCTGCTCGGCCAGCCAT  <  NC_002947/298489‑298344

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.