New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	401767 =	77 (1.460)	8 (0.170)	5/220	NT	10.1%	intergenic (+291/+138)	PP_0334/PP_0335	transposase/glutathione S‑transferase family protein
	?	NC_002947	401825 =	73 (1.550)					intergenic (+349/+80)	PP_0334/PP_0335	transposase/glutathione S‑transferase family protein

TCGCTACAGCGCCAGTGGCCTGAGGGCCCCTTCGCGGGTAAACCCGCTCCTACAAGGTTTTCCACAGTGTTCGCTATCTGTGGTGGGCTTTTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGTGTTCGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/401927‑401767 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgttcgcgggcaCGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGACCACCTCGGCATACCACGCCGCC  >  NC_002947/401825‑401968                                                                                                                                                                                                                                                                                                                   TCGCTACAGCGCCAGGGGCCTGAGGGCCCCTTCGCGGGTAAACCCGCTCCTACAAGGTTTTCCACAGTGTTCGCTATCTGTGGTGGGCTTTTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGT                                                                                                                                                             <  2:269938/150‑1   GCTACAGCGCCAGTGGCCTGAGGGCCCCTTCGCGGGTAAACCCGCTCCTACAAGGTTTTCCACAGTGTTCGCTATCTGTGGTGGGCTTTTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGTGT                                                                                                                                                           >  2:268327/1‑150    CTACAGCGCCAGTGGCCTGAGGGCCCCTTCGCGGGTAAACCCGCTCCTACAAGGTTTTCCACAGTGTTCGCTATCTGTGGTGGGCTTTTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGTGTT                                                                                                                                                          >  2:262842/1‑150         GCGCCAGTGGCCTGAGGGCCCCTTCGCGGGTAAACCCGCTCCTACAAGGTTTTCCACAGTGTTCGCTATCTGTGGTGGGCTTTTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGTGTTCGCGG                                                                                                                                                     <  1:1061148/150‑1           GCCAGTGGCCTGAGGGCCCCTTCGCGGGTAAACCCGCTCCTACAAGGTTTTCCACAGTGTTCGCTATCTGTGGTGGGCTTTTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGTGTTCGCGGGC                                                                                                                                                   >  2:847392/1‑150                    CTGAGGGCCCCTTCGCGGGTAAACCCGCTCCTACAAGGTTTTCCACAGTGTTCGCTATCTGTGGTGGGCTTTTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGT                                                                                                                                                             <  1:219583/131‑1                    CTGAGGGCCCCTTCGCGGGTAAACCCGCTCCTACAAGGTTTTCCACAGTGTTCGCTATCTGTGGTGGGCTTTTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGT                                                                                                                                                             >  2:219583/1‑131                                     GGTAAACCCGCTCCTACAAGGTTTTCCACAGTGTTCGCTATCTGTGGTGGGCTTTTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGTGTTCGCG                                                                                                                                                      >  1:828597/1‑121                                     GGTAAACCCGCTCCTACAAGGTTTTCCACAGTGTTCGCTATCTGTGGTGGGCTTTTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGTGTTCGCG                                                                                                                                                      <  2:828597/121‑1                                                      AAGGTTTTCCACAGTGTTCGCTATCTGTGGTGGGCTTTTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGTGTTCGCGG                                                                                                                                                     >  2:709104/1‑105                                                      AAGGTTTTCCACAGTGTTCGCTATCTGTGGTGGGCTTTTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGTGTTCGCGG                                                                                                                                                     <  1:709104/105‑1                                                                                                           CCGCGAACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGG                                                             <  2:622013/140‑1                                                                                                           CCGCGAACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGG                                                             >  1:622013/1‑140                                                                                                           CCGCGAACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAA                                                                         >  1:616215/1‑128                                                                                                           CCGCGAACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAA                                                                         <  2:616215/128‑1                                                                                                           CCGCGAACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGTGTTCGCGGGCAAGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCTCTCACGCCACTGGggt                                                   >  2:291840/1‑147                                                                                                           CCGCGAACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGTGTTCGCGGGCAAGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGT                                                                                    >  1:111479/1‑117                                                                                                           CCGCGAACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGTGTTCGCGGGCAAGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGT                                                                                    <  2:111479/117‑1                                                                                                                                 TGCCTGACACCCCACTATGTGTGTTCGCGGGCAAGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGACGC                             <  1:291840/150‑1                                                                                                                                                        ggaGCGGGCGTGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGACCACC                    >  2:544975/4‑136                                                                                                                                                        ggaGCGGGCGTGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGACCACC                    <  1:544975/133‑1                                                                                                                                                           GCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGACCACCTCGGCATACCACGCCGC   <  1:1197206/150‑1                                                                                                                                                            CGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGACCACCTCGGCATACCACGCCGCC  >  2:183117/1‑150                                                                                                                                                            CGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGACCACCTCGGCATACCACGCCGCC  <  1:1196842/150‑1                                                                                                                                                                                                                                                                                                                   TCGCTACAGCGCCAGTGGCCTGAGGGCCCCTTCGCGGGTAAACCCGCTCCTACAAGGTTTTCCACAGTGTTCGCTATCTGTGGTGGGCTTTTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCTGACACCCCATTATGTGTGTTCGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/401927‑401767 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgttcgcgggcaCGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGACCACCTCGGCATACCACGCCGCC  >  NC_002947/401825‑401968

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.