New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 482080 = | 64 (1.220) | 10 (0.200) | 9/238 | NT | 14.7% | coding (284/1272 nt) | PP_0396 | hypothetical protein |
? | NC_002947 | 482100 = | 54 (1.060) | coding (264/1272 nt) | PP_0396 | hypothetical protein |
TATGGAACATGGCGAGCAGATCAGTATTCCCGGGCGCGACATCGACGAACCGGTCTTGCATCATGGTCGTGGGGGCAAACAGACCATCGTGCATCCTGGCAACAAAGAATTCACTGCCGGTGAACACATCCCACGGCCGCAAGGCGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/482229‑482080 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggGATGTGTTCACCGGCAGTGAATTCTTTGTTGCCAGGATGCACGATGGTCTGTTTGCCCCCACGACCATGATGCAAGACCGGTTCGTCGATGTCGCGCCCGGGAATACTGATCTGCTCGCCATGTTCCATATCCA > NC_002947/482100‑482233 TATGGAACATGGCGAGCAGATCAGTATTCCCGGGCGCGACATCGACGAACCGGTCTTGCATCATGGTCGTGGGGGCAAACAGACCATCGTGCATCCTGGCAACAAAGAATTCACTGCCGGTGAACACATCCCACGGCCGCAAGGCGGTGG > 2:1316969/1‑150 CCCGGGCGCGACATCGACGAACCGGTCTTGCATCATGGTCGTGGGGGCAAACAGACCATCGTGCATCCTGGCAACAAAGAATTCACTGCCGGTGAACACATCCCACCGCCTTGCGGCCGTGGGATGTGTTCACCGGCAGTGAATTCTTTG < 2:1049601/150‑1 CGGGCGCGACAGCGACGAACCGGTCTTGCATCATGGTCGTGGGGGCAAACAGACCATCGTGCATCCTGGCAACAAAGAATTCACTGCCGGTGAACACATCCCACCGCCTTGCGGCCGTGGGATGTGTCCACCGGCAGTGAATTCTTTGTT < 1:58702/150‑1 GAATTCACTGCCGGTGAACACATCCCACCGCCTTGCGGCCGTGGGATGTGTTCACCGGCAGTGAATTCTTTGTTGCCAGGATGCACGATGGTCTGTTTGCCCCCACGACCATGATGCAAGACCGGTTCGTC < 1:1045440/131‑1 GAATTCACTGCCGGTGAACACATCCCACCGCCTTGCGGCCGTGGGATGTGTTCACCGGCAGTGAATTCTTTGTTGCCAGGATGCACGATGGTCTGTTTGCCCCCACGACCATGATGCAAGACCGGTTCGTC > 2:1045440/1‑131 ATCCCACGGCCGCAAGGCGGTGGGATGTGTTCACCGGCAGTGAATTCTTTGTTGCCAGGATGCACGATGGTCTGTTTGCCCCCACGACCATGATGCAAGACCGGTTCGTCGATGTCGCGCCCGGGAATACTGATCTGCTCGCCATGTTCC > 2:413431/1‑150 ATCCCACGGCCGCAAGGCGGTGGGATGTGTTCACCGGCAGTGAATTCTTTGTTGCCAGGATGCACGATGGTCTGTTTGCCCCCACGACCATGAT > 1:177924/1‑94 ATCCCACGGCCGCAAGGCGGTGGGATGTGTTCACCGGCAGTGAATTCTTTGTTGCCAGGATGCACGATGGTCTGTTTGCCCCCACGACCATGAT < 2:177924/94‑1 CCACGGCCGCAAGGCGGTGGGATGTGTTCACCGGCAGTGAATTCTTTGTTGCCAGGATGCACGATGGTCTGTTT < 1:1173024/74‑1 CCACGGCCGCAAGGCGGTGGGATGTGTTCACCGGCAGTGAATTCTTTGTTGCCAGGATGCACGATGGTCTGTTT > 2:1173024/1‑74 GGCCGCAAGGCGGTGGGATGTGTTCACCGGCAGTGAATTCTTTGTTGCCAGGATGCACGATGGTCTGTTTGCCCCCACGACCATGATGCAAGACCGGTTCGTCGATGTCGCGCCCGGGAATACTGATCTGCTCGCCATGTTCCATATCCA < 1:413431/150‑1 TATGGAACATGGCGAGCAGATCAGTATTCCCGGGCGCGACATCGACGAACCGGTCTTGCATCATGGTCGTGGGGGCAAACAGACCATCGTGCATCCTGGCAACAAAGAATTCACTGCCGGTGAACACATCCCACGGCCGCAAGGCGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/482229‑482080 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggGATGTGTTCACCGGCAGTGAATTCTTTGTTGCCAGGATGCACGATGGTCTGTTTGCCCCCACGACCATGATGCAAGACCGGTTCGTCGATGTCGCGCCCGGGAATACTGATCTGCTCGCCATGTTCCATATCCA > NC_002947/482100‑482233 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |