| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 582184 = | 67 (1.270) | 5 (0.100) | 4/240 | NT | 7.0% | coding (47/1923 nt) | selB | selenocysteyl‑tRNA‑specific translation elongation factor |
| ? | NC_002947 | 582224 = | 67 (1.310) | coding (87/1923 nt) | selB | selenocysteyl‑tRNA‑specific translation elongation factor | |||||
TAAAGCGCTCGTGGCCCGGCACATCGATGAAGCCGGTCAGCGGCGCGCCTTCGCTCAGCGCCGCATAGCGGTAGCCAAGGTCGATGGTCATGCCGCGGGCGCGCTCTTCTTGCCGCTGGTCGCCGGCCTGGCCGGTCAGCGCCAGCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/582333‑582184‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCTTCATCGATGTGCCGGGCCACGAGCGCTTTATCCACAACATGCTGGCCGGCGCCCATGGCATCGACCT > NC_002947/582224‑582370 TAAAGCGCTCGTGGCCCGGCACATCGATGAAGCCGGTCAGCGGCGCGCCTTCGCTCAGCGCCGCATAGCGGTAGCCAAGGTCGATGGTCATGCCGCGGGCGCGCTCTTCTTGCCGCTGGTCGCCGGCCTGGCCGGTCAGCGCCAGCAGCA > 2:629528/1‑150 AAAGCGCTCGTGGCCCGGCACATCGATGAAGCCGGTCAGCGGCGCGCCTTCGCTCAGCGCCGCATAGCGGTAGCCAAGGTCGATGGTCATGCCGCGGGCGCGCTCTTCTTGCCGCTGGTCGCCGGCCTGGCCGGTCAGCGCCAGCAG < 1:1044506/147‑1 AAAGCGCTCGTGGCCCGGCACATCGATGAAGCCGGTCAGCGGCGCGCCTTCGCTCAGCGCCGCATAGCGGTAGCCAAGGTCGATGGTCATGCCGCGGGCGCGCTCTTCTTGCCGCTGGTCGCCGGCCTGGCCGGTCAGCGCCAGCAG > 2:1044506/1‑147 CTTCGCTCAGCGCCGCATAGCGGTAGCCAAGGTCGATGGTCATGCCGCGGGCGCGCTCTTCTTGCCGCTGGTCGCCGGCCTGGCCGGTCAGCGCCAGCAGCA < 1:171882/102‑1 CTTCGCTCAGCGCCGCATAGCGGTAGCCAAGGTCGATGGTCATGCCGCGGGCGCGCTCTTCTTGCCGCTGGTCGCCGGCCTGGCCGGTCAGCGCCAGCAGCA > 2:171882/1‑102 TTCTTGCCGCTGGTCGCCGGCCTGGCCGGTCAGCGCCAGCAGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCTTCATCGATGTGCCGGGCCAC < 1:177067/144‑1 TTCTTGCCGCTGGTCGCCGGCCTGGCCGGTCAGCGCCAGCAGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCTTCATCGATGTGCCGGGCCAC > 2:177067/1‑144 TTCTTGCCGCTGGTCGCCGGCCTGGCCGGTCAGCGCCAGCAGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCTTCAT > 1:940252/1‑128 TTCTTGCCGCTGGTCGCCGGCCTGGCCGGTCAGCGCCAGCAGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCTTCAT < 2:940252/128‑1 TTGCCGCTGGTCGCCGGCCTGGCCGGTCAGCGCCAGCAGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCTTCATCGATGTGCCGGGCCACGAGCGCTTT > 1:340305/1‑150 GCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCTTCATCGATGTGCCGGGCCACGAGCGCTTTATCCACAACATGCTGGCCGGCGCCCATGGCATCGACCT > 1:1413004/1‑150 TAAAGCGCTCGTGGCCCGGCACATCGATGAAGCCGGTCAGCGGCGCGCCTTCGCTCAGCGCCGCATAGCGGTAGCCAAGGTCGATGGTCATGCCGCGGGCGCGCTCTTCTTGCCGCTGGTCGCCGGCCTGGCCGGTCAGCGCCAGCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/582333‑582184‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCTTCATCGATGTGCCGGGCCACGAGCGCTTTATCCACAACATGCTGGCCGGCGCCCATGGCATCGACCT > NC_002947/582224‑582370 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |