New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 675411	55 (1.050)	6 (0.130)	6/224	NT	11.0%	coding (291/696 nt)	PP_0577	hypothetical protein
	?	NC_002947	= 675439	47 (0.980)					coding (263/696 nt)	PP_0577	hypothetical protein

CCGTAGTAGGGGTCGTAGGTGTCGTAGTCACGCACTTGGCGCAAGCGTTTTTCCAGGCGCATATCGGCGCTCACCAGCAAGTCGCCAGGGCCTGCGCGAGAGGGGCGCAGGCCATGCTGGTCGAGCGCACCGCTGACGGCATCGGCCAGTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/675259‑675411 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccagttgcCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTGGCCGATGCCGTCAGCGGTGCGCTCGACCAGCATGGCCTGCGCCCCTCTCGCGCAGGCCCTGGCGACTTGCTGGTGAGCGCCGATATGCGCCTGGAAAAACGCTTGCGCCA  <  NC_002947/675439‑675295                                                                                                                                                                                                                                                                                                            CCGTAGTAGGGGTCGTAGGTGTCGTAGTCACGCACTTGGCGCAAGCGTTTTTCCAGGCGCATATCGGCGCTCACCAGCAAGTCGCCAGGGCCTGCGCGAGAGGGGCGCAGGCCATGCTGGTCGAGCGCACCGCTGACGGCATCGGCCAGT                                                                                                                                                      >  2:705236/1‑150   GTAGTAGGGGTCGTAGGTGTCGTAGTCACGCACTTGGCGCAAGCGTTTTTCCAGGCGCATATCGGCGCTCACCAGCAAGTCGCCAGGGCCTGCGCGAGAGGGGCGCAGGCCATGCTGGTCGAGCGCACCGCTGACGGCATCGGCCAGTTG                                                                                                                                                    <  2:1235326/150‑1    TAGTAGGGGTCGTAGGTGTCGTAGTCACGCACTTGGCGCAAGCGTTTTTCCAGGCGCATATCGGCGCTCACCAGCAAGTCGCCAGGGCCTGCGCGAGAGGGGCGCAGGCCATGCTGGTCGAGCGCACCGCTGACGGCATCGGC                                                                                                                                                          <  1:79189/143‑1    TAGTAGGGGTCGTAGGTGTCGTAGTCACGCACTTGGCGCAAGCGTTTTTCCAGGCGCATATCGGCGCTCACCAGCAAGTCGCCAGGGCCTGCGCGAGAGGGGCGCAGGCCATGCTGGTCGAGCGCACCGCTGACGGCATCGGC                                                                                                                                                          >  2:79189/1‑143      GTAGGGGTCGTAGGTGTCGTAGTCACGCACTTGGCGCAAGCGTTTTTCCAGGCGCATATCGGCGCTCACCAGCAAGTCGCCAGGGCCTGCGCGAGAGGGGCGCAGGCCATGCTGGTCGAGCGCACCGCTGACGGCATC                                                                                                                                                             >  1:183389/1‑138      GTAGGGGTCGTAGGTGTCGTAGTCACGCACTTGGCGCAAGCGTTTTTCCAGGCGCATATCGGCGCTCACCAGCAAGTCGCCAGGGCCTGCGCGAGAGGGGCGCAGGCCATGCTGGTCGAGCGCACCGCTGACGGCATC                                                                                                                                                             <  2:183389/138‑1          GGGTCGTAGGTGTCGTAGTCACGCACTTGGCGGAAGCGTTTTTCCAGGCGCATATCCGCGCTCACCAGCAAGCAGCCAGGTCCTGCGCGAGAGGGGCGCAGGCCATGCTGGTCGAGCGCACCGCTGACGGCATCGGCCAGTTGCCCAGCG                                                                                                                                             >  1:1241823/1‑150                                 CACTTGGCGCAAGCGTTTTTCCAGCCGCATATCGGCGCTCACCAGCAAGTCGCCAGGGCCTGCGCGAGAGGGGCGCAGGCCATGCTGGTCGAGCGCACCGCTGACGGCATCGGCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCG                                                                                                                      <  2:1241823/150‑1                                         GCAAGCGTTTTTCCAGGCGCATATCGGCGCTCACCAGCAAGTCGCCAGGGCCTGCGCGAGAGGGGCGCAGGCCATGCTGGTCGAGCGCACCGCTGACGGCATCGGCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTGGC                                                                                                              >  1:677249/1‑150                                         GCAAGCGTTTTTCCAGGCGCATATCGGCGCTCACCAGCAAGTCGCCAGGGCCTGCGCGAGAGGGGCGCAGGCCATGCTGGTCGAGCGCACCGCTGACGGCATCGGCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTGGC                                                                                                              <  2:677249/150‑1                                                                          CCAGCAAGTCGCCAGGGCCTGCGCGAGAGGGGCGCAGGCCATGCTGGTCGAGCGCACCGCTGACGGCATCGGCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTG                                                                                                                >  1:378855/1‑115                                                                          CCAGCAAGTCGCCAGGGCCTGCGCGAGAGGGGCGCAGGCCATGCTGGTCGAGCGCACCGCTGACGGCATCGGCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTG                                                                                                                <  2:378855/115‑1                                                                                                                                               CGGCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTGGCCGATGCCGTCAGCGGTGCGCTCGACCAGCATGGCCTGCGCCCCTCTCGCGCAGGCCCTGGCGACTTGCTGGTGAGCGCCGATATGCGCCTGGAAAAACGCTT        >  1:1184324/1‑150                                                                                                                                                  CCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTGGCCGATGCCGTCAGCGGTGCGCTCGACCAGCATGGCCTGCGCCCCTCTCGCGCAGGCCCTGGCGACTTGCTGGTGAGCGCCGATATGCGCCTGGAAAAACGCTTGCG     >  1:1041922/1‑150                                                                                                                                                     GTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTGGCCGATGCCGTCAGCGGTGCGCTCGACCAGCATGGCCTGCGCCCCTCTCGCGCAGGCCCTGGCGACTTGCTGGTGAGCGCCGATATGCGCCTGGAAAAACGCTTGCGCCA  >  2:472473/1‑150                                                                                                                                                                                                                                                                                                            CCGTAGTAGGGGTCGTAGGTGTCGTAGTCACGCACTTGGCGCAAGCGTTTTTCCAGGCGCATATCGGCGCTCACCAGCAAGTCGCCAGGGCCTGCGCGAGAGGGGCGCAGGCCATGCTGGTCGAGCGCACCGCTGACGGCATCGGCCAGTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/675259‑675411 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccagttgcCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTGGCCGATGCCGTCAGCGGTGCGCTCGACCAGCATGGCCTGCGCCCCTCTCGCGCAGGCCCTGGCGACTTGCTGGTGAGCGCCGATATGCGCCTGGAAAAACGCTTGCGCCA  <  NC_002947/675439‑675295

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.