| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 874287 = | 70 (1.330) | 3 (0.070) | 3/202 | NT | 5.3% | intergenic (+21/‑138) | PP_0758/PP_0759 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | 874351 = | 50 (1.160) | intergenic (+85/‑74) | PP_0758/PP_0759 | hypothetical protein/hypothetical protein | |||||
ACTTACGCATGAAAACACTCCCTATCCACATGCGCCGTATCCTAGGCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGGAGCGGGCTTGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/874455‑874287‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taggagcgggcttgcccgcgaaGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGC > NC_002947/874351‑874499 ACTTACGCATGAAAACACTCCCTATCCACATGCGCCGTATCCTAGGCCGAGTCGACCGTTGCCAGCATTGCGGCAGGGAATATTTTCGGCGCCTGCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAG < 1:678370/150‑1 ACGCATGAAAACACTCCCTATCCACATGCGCCGTATCCTAGGCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTTTAGGAGC < 2:563793/150‑1 GCATGAAAACACTCCCTATCCACATGCGCCGTATCCTAGGCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGGAGCGG < 1:418524/150‑1 ACTCCCTATCCACATGCGCCGTATCCTAGGCCGCGGTGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGGAGCGGGCTTGCCCGC > 1:1182016/1‑150 TCCCTATCCACATGCGCCGTATCCTAGGCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGGAGCGGGCTTG < 2:823665/143‑1 TCCCTATCCACATGCGCCGTATCCTAGGCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGGAGCGGGCTTG > 1:823665/1‑143 GCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGGAGCGGGCTTGCC > 2:84815/1‑118 GCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGGAGCGGGCTTGCC < 1:84815/118‑1 CCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGGAGCGG < 2:1076589/102‑1 CCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGGAGCGG > 1:1076589/1‑102 CCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGGAGCGGGCTTGCCC < 2:895557/94‑1 CCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGGAGCGGGCTTGCCC > 1:895557/1‑94 TCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAG > 2:1034460/1‑150 GCTCCTAAAGGGGTAACACGATCATTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGAT > 1:96327/1‑131 GCTCCTAAAGGGGTAACACGATCATTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGAT < 2:96327/131‑1 GGAGCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGC < 1:1413515/150‑1 GGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCA < 2:1298702/150‑1 GCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGC < 1:61754/46‑1 GCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGC > 2:61754/1‑46 CCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGTCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTG > 2:344836/1‑150 CCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGG < 2:365733/92‑1 CCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGG > 1:365733/1‑92 CGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGC > 2:295599/1‑105 CGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGC < 1:295599/105‑1 AGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGC < 2:418524/150‑1 ACTTACGCATGAAAACACTCCCTATCCACATGCGCCGTATCCTAGGCCGAGTCGCCAGTGGCTGCCATAGCCGCAGGGAAGATTTTCGTCGCCTGAACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAGGGGTAACACGATCATTGTAGGAGCGGGCTTGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/874455‑874287‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taggagcgggcttgcccgcgaaGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGTGGATAGGGAGTGTTTTCATGCGTAAGTCTTTTGTCATCAGCCTGCTGAGTGCTGGCATCCTGCTGGCCGGC > NC_002947/874351‑874499 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |