New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 885137 | 56 (1.070) | 3 (0.060) | 3/230 | NT | 5.5% | coding (1045/2718 nt) | PP_0767 | LuxR family transcriptional regulator |
? | NC_002947 | = 885162 | 51 (1.040) | coding (1070/2718 nt) | PP_0767 | LuxR family transcriptional regulator |
CCGCCACGACAGCGCCGCCGTCCTGAGCTTCCTGCAGGCGCATCAGGTGTTCCTTGTGCCGCTGGACGAGCATGGCCACTGGTTCCGCTATCACCATTTGTTCTCCGACCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/885025‑885137 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgacctgcGATTCGCTCGCCTGGCGGCTGCGCAGCAGGTCGGAGAACAAATGGTGATAGCGGAACCAGTGGCCATGCTCGTCCAGCGGCACAAGGAACACCTGATGCGCCTGCAGGAAGCTCAGGACGGCGGCGCTGTCGTGGCGGCCACGCATCG < NC_002947/885162‑885015 CCGCCACGACAGCGCCGCCGTCCTGAGCTTCCTGCAGGCGCATCAGGTGTTCCTTGTGCCGCTGGACGAGCATGGCCACTGGTTCCGCTATCACCATTTGTTCTCCGACCTGCGATTCGCTCGCCTGGCGGCTGCGCAGCAGGTCGGAGA < 2:691482/150‑1 CGCCACGACAGCGCCGCCGTCCTGAGCTTCCTGCAGGCGCATCAGGTGTTCCTTGTGCCGCTGGACGAGCATGGCCACTGGTTCCGCTATCACCATTTGTTCTCCGACCTGCGATTCGCTCGCCTGGCGGCTGCGCAGCAGGTC < 1:66476/144‑1 CGCCACGACAGCGCCGCCGTCCTGAGCTTCCTGCAGGCGCATCAGGTGTTCCTTGTGCCGCTGGACGAGCATGGCCACTGGTTCCGCTATCACCATTTGTTCTCCGACCTGCGATTCGCTCGCCTGGCGGCTGCGCAGCAGGTC > 2:66476/1‑144 CTGCGATTCGCTCGCCTGGCGGCTGCGCAGCAGGTCGGAGAACAAATGGTGATAGCGGAACCAGTGGCCATGCTCGTCCAGCGGCACAAGGAACACCTGATGCGCCTGCAGGAAGCTCAGGACGGCGGCGCTGT > 1:1019278/1‑134 CTGCGATTCGCTCGCCTGGCGGCTGCGCAGCAGGTCGGAGAACAAATGGTGATAGCGGAACCAGTGGCCATGCTCGTCCAGCGGCACAAGGAACACCTGATGCGCCTGCAGGAAGCTCAGGACGGCGGCGCTGT < 2:1019278/134‑1 GCGATTCGCTCGCCTGGCGGCTGCGCAGCAGGTCGGAGAACAAATGGTGATAGCGGAACCAGTGGCCATGCTCGTCCAGCGGCACAAGGAACACCTGATGCGCCTGCAGGAAGCTCAGGACGGCGGCGCTGTCGTGGCGGCCACGCATCG > 1:369022/1‑150 CCGCCACGACAGCGCCGCCGTCCTGAGCTTCCTGCAGGCGCATCAGGTGTTCCTTGTGCCGCTGGACGAGCATGGCCACTGGTTCCGCTATCACCATTTGTTCTCCGACCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/885025‑885137 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgacctgcGATTCGCTCGCCTGGCGGCTGCGCAGCAGGTCGGAGAACAAATGGTGATAGCGGAACCAGTGGCCATGCTCGTCCAGCGGCACAAGGAACACCTGATGCGCCTGCAGGAAGCTCAGGACGGCGGCGCTGTCGTGGCGGCCACGCATCG < NC_002947/885162‑885015 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |