| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1181777 = | 62 (1.180) | 3 (0.060) | 3/238 | NT | 5.2% | coding (824/1407 nt) | cumA | multicopper oxidase |
| ? | NC_002947 | 1181813 = | 49 (0.960) | coding (860/1407 nt) | cumA | multicopper oxidase | |||||
CGGCAGCGCGGGCGGCCAGTCACTCGGCGCGTCGTTGCTGGCCACCGAACGCAGGGTGCCCAGGCGCACGAAACCGTCGCGCAGGGAGATTTCCTCACCCGCCTCGGGAATGCGGAT‑GGCCAGGCAGATACGCATGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1181916‑1181777‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgAGGCGGGTGAGGAAATCTCCCTGCGCGACGGTTTCGTGCGCCTGGGCACCCTGCGTTCGGTGGCCAGCAACGACGCGCCGAGTGACTGGCCGCCCGCGCTGCCGCCCAATCCGATCGCCGAGCCGGACCTGGAGAATGCCGAAAAGCTG > NC_002947/1181813‑1181961 CGGCAGCGCGGGCGGTCAGTCACTCGGCGCGTCGTTGCTGGCCACCGAACGCAGGGTGCCCAGGCGCACGAAACCGTCGCGCAGGGAGATTTCCTCACCCGCCTCGGGCATGCGTATCTGCCTGGC‑CATCCGCATTCCCGAGGCGGGTGA < 2:992098/150‑1 CTCGGGAATGCGGAT‑GGCCAGGCAGATACGCATGCCCGAGGCGGGTGAGGAAATCTCCCTGCGCGACGGTTTCGTGCGCCTGG > 1:421409/1‑83 CTCGGGAATGCGGAT‑GGCCAGGCAGATACGCATGCCCGAGGCGGGTGAGGAAATCTCCCTGCGCGACGGTTTCGTGCGCCTGG < 2:421409/83‑1 CCGAGGCGGGTGAGGAAATCTCCCTGCGCGACGGTTTCGTGCGCCTGGGCACCCTGCGTTCGGTGGCCAGCAACGACGCGCCGAGTGACTGGCCGCCCGCGCTGCCG < 1:849904/107‑1 CCGAGGCGGGTGAGGAAATCTCCCTGCGCGACGGTTTCGTGCGCCTGGGCACCCTGCGTTCGGTGGCCAGCAACGACGCGCCGAGTGACTGGCCGCCCGCGCTGCCG > 2:849904/1‑107 GAGGCGGGTGAGGAAATCTCCCTGCGCGACGGTTTCGTGCGCCTGGGCACCCTGCGTTCGGTGGCCAGCAACGACGCGCCGAGTGACTGGCCGCCCGCGCTGCCGCCCAATCCGATCGCCGAGCCGGACCTGGAGAATGCCGAAAAGCTG > 2:1232801/1‑150 CGGCAGCGCGGGCGGCCAGTCACTCGGCGCGTCGTTGCTGGCCACCGAACGCAGGGTGCCCAGGCGCACGAAACCGTCGCGCAGGGAGATTTCCTCACCCGCCTCGGGAATGCGGAT‑GGCCAGGCAGATACGCATGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1181916‑1181777‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgAGGCGGGTGAGGAAATCTCCCTGCGCGACGGTTTCGTGCGCCTGGGCACCCTGCGTTCGGTGGCCAGCAACGACGCGCCGAGTGACTGGCCGCCCGCGCTGCCGCCCAATCCGATCGCCGAGCCGGACCTGGAGAATGCCGAAAAGCTG > NC_002947/1181813‑1181961 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |