New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1341983 =	52 (0.990)	6 (0.120)	4/236	NT	10.6%	coding (240/924 nt)	PP_1166	DMT superfamily permease
	?	NC_002947	1342010 =	51 (1.010)					coding (213/924 nt)	PP_1166	DMT superfamily permease

AACCACATCGCCGCGCGCATCGCCTTCGATGACGGCACCGGCGTGCTGCTGGCGATTCTCTGCCGCTCAGGCATCACGTTCCTGGTACTGGCCGGGCTGCTGCTGTGGCAACGCCAGGCCCTGGCCCTGCCCGCCGGTGCGCGCCGG‑TGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1342135‑1341983 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagGGCCAGGGCCTGGCGTTGCCACAGCAGCAGCCCGGCCAGTACCAGGAACGTGATGCCTGAGCGGCAGAGAATCGCCAGCAGCACGCCGGTGCCGTCATCGAAGGCGATGCGCGCGGCGATGTGGTTGCCAGCGAATGAACAGGCCA  >  NC_002947/1342010‑1342155                                                                                                                                                                                                                                                                                                              AACCACATCGCCGCGCGCATCGCCTTCGATGACGGCACCGGCGTGCTGCTGGCGATTCTCTGCCGCTCAGGCATCACGTTCCTGGTACTGGCCGGGCTGCTGCTGTGGCAACGCCAGGCCCTGGCCCTGCCCGCCGGTGCGCGCCGG‑TGG                                                                                                                                                       <  1:986964/150‑1  ACCACATCGCCGCGCGCATCGCCTTCGATGACGGCACCGGCGTGCTGCTGGCGATTCTCTGCCGCTCAGGCATCACGTTCCTGGTACTGGCCGGGCTGCTGCTGTGGCAACGCCAGGCCCTGGCCCTGCCCGCCGGTGCGCGCCGG‑TGGC                                                                                                                                                      <  2:1343625/150‑1    CACATCGCCGCGCGCATCGCCTTCGATGACGGCACCGGCGTGCTGCTGGCGATTCTCTGCCGCCCAGGCATCACGTTCCTGGTACTGGCCGGGCTGCTGCTGTGGCAACGCCAGGCCCTGGCCCTGCCCGCCGGTGCGCGCCGG‑TGGCAG                                                                                                                                                    <  2:500739/150‑1                       cgTTCGATGACGGCACCGGCGTGCTGCTGGCGATTCTCTGCCGCTCAGGCATCACGTTCCTGGTACTGGCCGGGCTGCTGCTGTGGCAACGCCAGGCCCTGGCCCTG‑CCACCGGCGCGCACCGGCGGGCAGGGCCAGGGCCTGGCGTTGC                                                                                                                                 <  2:884205/148‑1                                                                                                                              CCTGCCCGCCGGTGCGCGCCGG‑TGGCAGGGCCAGGGCCTGGCGTTGCCACAGCAGCAGCCCGGCCAGTACCAGGAACGTGATGCCTGAGCGGCAGAGAATCGCCAGCACAACACCGGTGCCGTCATCGAAGGCGATGCGCGCGGCGATGT                          >  1:74728/1‑150                                                                                                                              CCTGCCCGCCGGTGCGCGCCGG‑TGGCAGGGCCAGGGCCTGGCGTTGCCACAGCAGCAGCCCGGC                                                                                                                >  1:332137/1‑64                                                                                                                              CCTGCCCGCCGGTGCGCGCCGG‑TGGCAGGGCCAGGGCCTGGCGTTGCCACAGCAGCAGCCCGGC                                                                                                                <  2:332137/64‑1                                                                                                                              CCTGCCCGCCGGTGCGCGCCGG‑TGGCAGGGCCAGGGCCTGGCGTTGCCAAACCAGCAGCCCGGCCAGTACCAGGAACGTGATGCCTGAGCGGCAGAGAATCGCCAGCAGCACGCCGGTGCCGTCATCGAAGGCGATGCGCGCGGCGATGT                          >  1:812801/1‑150                                                                                                                                    CGCCGGTGCGCGCCGG‑TGGCAGGGCCAGGGCCTGGCGTTGCCACAGCAGCAGCCCGGCCAGTACCAGGAACGTGATGCCCGAGCGGCAGAGGATCGCCAGCAGCACGCCGGTGCCGTCATCGAAGGCGATGCGCGCGGCGATGTGGTTGC                    <  1:884205/150‑1                                                                                                                                                       GCAGGGCCAGGGCCTGGCGTTGCCACAGCAGCAGCCCGGCCAGTACCAGGAACGTGATGCCTGAGCGGCAGAGAATCGCCAGCAGCACGCCGGGGCCGTCATCGAAGGCGATGCGCGCGGCGATGTGGTTGCCAGCGAATGAACAGGCCA  <  2:51796/150‑1                                                                                                                                                                                                                                                                                                              AACCACATCGCCGCGCGCATCGCCTTCGATGACGGCACCGGCGTGCTGCTGGCGATTCTCTGCCGCTCAGGCATCACGTTCCTGGTACTGGCCGGGCTGCTGCTGTGGCAACGCCAGGCCCTGGCCCTGCCCGCCGGTGCGCGCCGG‑TGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1342135‑1341983 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagGGCCAGGGCCTGGCGTTGCCACAGCAGCAGCCCGGCCAGTACCAGGAACGTGATGCCTGAGCGGCAGAGAATCGCCAGCAGCACGCCGGTGCCGTCATCGAAGGCGATGCGCGCGGCGATGTGGTTGCCAGCGAATGAACAGGCCA  >  NC_002947/1342010‑1342155

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.