| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1437236 = | 65 (1.240) | 4 (0.080) | 3/238 | NT | 6.0% | coding (804/927 nt) | prpA | 4‑hydroxyproline epimerase |
| ? | NC_002947 | 1437267 = | 62 (1.220) | coding (773/927 nt) | prpA | 4‑hydroxyproline epimerase | |||||
GACAGCCGCAACTTCGTGATGTGCCCCGGCAAGGCCTACGACCGCTCCCCGTGCGGCACAGGCACCAGCGCCAAGCTGGCCTGCCTGGCCGCCGACGGCAAGCTTGCCGAAGGCCAGACCTGGGTGCAGGCCAGCATCACCGGCAGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1437385‑1437236‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagGTCTGGCCTTCGGCAAGCTTGCCGTCGGCGGCCAGGCAGGCCAGCTTGGCGCTGGTGCCTGTGCCGCACGGGGAGCGGTCGTAGGCCTTGCCGGGGCACATCACGAAGTTGCGGCTGTCGGCGTTGGGGTCGTCGGCGAACAGCTCGAT > NC_002947/1437267‑1437415 GACAGCCGCAACTTCGTGATGTGCCCCGGCAAGGCCTACGACCGCTCCCCGTGCGGCACAGGCACCAGCGCCAAGCTGGCCTGCCTGGCCGCCGACGGCAAGCTTGCCGAAGGCCAGACCTGGGTGCAGGCCAGCATCACCGGCAGCCAG < 1:463634/150‑1GACAGCCGCAACTTCGTGATGTGCCCCGGCAAGGCCTACGACCGCTCCCCGTGCGGCACAGGCACCAGCGCCAAGCTGGCCTGCCTGGCCGCCGACGGCAAGCTTGCCGAAGGCCAGACCTGGGTGCAGGCCAGCATCACCGGCAGCCAG > 2:1351001/1‑150GACAGCCCCAACTTCGTGAGGTGCCCCGGCAAGGCCGACGACCGCTCCCCGTGCGGCAGAGGCGCAAGCGCCAAGCTGGCCTGGCTTGCCGCCGACGGCAAGCTTGCAGAAGGCCAGACCTGGGTGCAGGCCAGCATCACCGGCAGCCAG < 1:597747/150‑1 CCCCGGCAGGGCCTACGACCGCTCCCCGTGCGGCACAGGCACCAGCGCCAAGCTGGCCTGCCTGGCCGCCGACGGCAAGCTTGCCGAAGGCCAGACCTGGGTGCAGGCCAGCATCACCGGCAGCC < 1:274183/125‑1 CCCCGGCAGGGCCTACGACCGCTCCCCGTGCGGCACAGGCACCAGCGCCAAGCTGGCCTGCCTGGCCGCCGACGGCAAGCTTGCCGAAGGCCAGACCTGGGTGCAGGCCAGCATCACCGGCAGCC > 2:274183/1‑125 CGAAGGCCAGACCTGGGTGCAGGCCAGCATCACCGGCAGCCAGGTCTGGCCTTCGGCAAGCTTGCCGTCGGCGGCCAGGCAGGCCAGCTTGGCGCTGGTGCCTGTGCCGCACGGGGAGCGGTCGTAGGCCTTGCCGGGGCACATCACGAA > 2:722657/1‑150 TGGGTGCAGGCCAGCATCACCGGCAGCCAGGTCTGGCCTTCGGCAAGCTTGCCGTCGGCGGCCAGGCAGGCCAGCTTGGCGCTGGTGCCTGTGCCGCACGGGGAGCGGTCGTAGGCCTTGCCGGGGCGCATCACGAAGTTGCGGCTGTCG > 2:78729/1‑150 TGGGTGCAGGCCAGCATCACCGGCAGCCAGGTCTGGCCTTCGGCAAGCTTGCCGTCGGCGGCCAGGCAGGCCAGCTTGGCGCTGGTGCCTGTGC < 1:953236/94‑1 TGGGTGCAGGCCAGCATCACCGGCAGCCAGGTCTGGCCTTCGGCAAGCTTGCCGTCGGCGGCCAGGCAGGCCAGCTTGGCGCTGGTGCCTGTGC > 2:953236/1‑94 CCAGGTCTGGCCTTCGGCAAGCTTGCCGTCGGCGGCCAGGCAGGCCAGCTTGGCGCTGGTGCCTGTGCCGCACGGGGAGCGGTCGTAGGCCTTGCCGGGGCACATCACGAAGTTGCGGCTGTCGGCGTTGGGGTCGTCGGCGAACAGCTC > 1:1375348/1‑150 AGGTCTGGCCTTCGGCAAGCTTGCCGTCGGCGGCCAGGCAGGCCAGCTTGGCGCTGGTGCCTGTGCCGCACGGGGAGCGGTCGTAGGCCTTGCCGGGGCACATCACGAAGTTGCGGCTGTCGGCGTTGGGGTCGTCGGCGAACAGCTCGA < 1:722657/150‑1 GGTCTGGCCTTCGGCAAGCTTGCCGTCGGCGGCCAGGCAGGCCAGCTTGGCGCTGGTGCCTGTGCCGCAAGGGGAGCGGTCGTAGGCCTTGCCGGGGCACATCACGAAGTTGCGGCTGTCGGCGTTGGGGTCGTCGGCGAACAGCTCGAT < 2:142922/150‑1 GACAGCCGCAACTTCGTGATGTGCCCCGGCAAGGCCTACGACCGCTCCCCGTGCGGCACAGGCACCAGCGCCAAGCTGGCCTGCCTGGCCGCCGACGGCAAGCTTGCCGAAGGCCAGACCTGGGTGCAGGCCAGCATCACCGGCAGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1437385‑1437236‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagGTCTGGCCTTCGGCAAGCTTGCCGTCGGCGGCCAGGCAGGCCAGCTTGGCGCTGGTGCCTGTGCCGCACGGGGAGCGGTCGTAGGCCTTGCCGGGGCACATCACGAAGTTGCGGCTGTCGGCGTTGGGGTCGTCGGCGAACAGCTCGAT > NC_002947/1437267‑1437415 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |