| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1598856 = | 68 (1.290) | 8 (0.170) | 7/218 | NT | 14.3% | intergenic (‑53/+78) | dctB/bglX | C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase |
| ? | NC_002947 | 1598894 = | 36 (0.770) | intergenic (‑91/+40) | dctB/bglX | C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase | |||||
CGGGTTGCCGAACCAGGGGAGTTCAATGTCCAGGTAGGGCTGGATTCCCAGGCGGTGCAGCAGCAGAGCTTTGAATTGCTTTGACTGAAAAAGGCCGCCTGTTCCGGCCTTTTCGCGGGTAAAACCGCGCCTACAGGTGCTGCAGAGTACCTGTAGGCGC‑GG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1599017‑1598856‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctgtaggcgc‑ggTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGACATTGAACTCCCCTGGTTCGGCAACCCGCTGCAACTGGCCATTGTAGAACTT > NC_002947/1598894‑1599041 CGGGTTGCCGAACCAGGGGAGTTCAATGTCCAGGTAGGGCTGGATTCCCAGGCGGTGCAGCAGCAGAGCTTTGAATTGCTTTGACTGAAAAAGGCCGCCTGTTCCGGCCTTTTCGCGGGTAAAACCGCGCCTACAGGTGCTGCAGAGTAC < 2:188376/150‑1 TTGCCGAACCAGGGGAGTTCAATGTCCAGGTAGGGCTGGATTCCCAGGCGGTGCAGCAGCAGAGCTTTGAATTGCTTTGACTGAAAAAGGCCGCCTGTTCCGGCCTTTTCGCGGGTAAAACCGCGCCTACAGGTGCTGCAGAGTAC > 1:228537/1‑146 TTGCCGAACCAGGGGAGTTCAATGTCCAGGTAGGGCTGGATTCCCAGGCGGTGCAGCAGCAGAGCTTTGAATTGCTTTGACTGAAAAAGGCCGCCTGTTCCGGCCTTTTCGCGGGTAAAACCGCGCCTACAGGTGCTGCAGAGTAC < 2:228537/146‑1 TGCCGAACCAGGGGAGTTCAATGTCCAGGTAGGGCTCGATTCCCAGGCGGTGCAGCAGCAGAGCTTTGAATTGCTTTGACTGAAAAAGGCCGCCTGTTCCGGCCTTTTCGCGGGTAAAACCGCGCCTACAGGTGCTGCAGAGTACCTGTA < 2:1182725/150‑1 GAACCAGGGGAGTTCAATGTCCAGGTAGGGCTAGATTACCAGGCGGTGCAGCAGCAGAGCTTTGAATTGCTTTGACTGAAAAAGGCCGCCTGTTCCGGCCTTTTCGCGGGTAAAACCGCGCCTACAGGTGCTGCAGAGTACCTGTAGGCG > 1:274361/1‑150 CCAGGGGAGTTCAATGTCCAGGTAGGGCTGGATTCCCAGGCGGTGCAGCAGCAGAGCTTTGAATTGCTTTGACTGAAAAAGGCCGCCTGTTCCGGCCTTTTCGCGGGTAAAACCGCGCCTACAGGTGCTGCAGAGTACCTGTAGGCGC‑GG < 2:452366/150‑1 GCGCCTACAGGTGCTGCAGAGTACCTGTAGGCGC‑GGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTG > 1:1312426/1‑97 GCGCCTACAGGTGCTGCAGAGTACCTGTAGGCGC‑GGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTG < 2:1312426/97‑1 CTACAGGTGCTGCAGAGTACCTGTAGGCGC‑GGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAA < 1:868878/77‑1 CTACAGGTGCTGCAGAGTACCTGTAGGCGC‑GGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAA > 2:868878/1‑77 AGGTGCTGCAGAGTACCTGTAGGCGCGGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGACATTGAACTCCCCTGGTTCGGCAAC > 2:435608/1‑150 GTGCTGCAGAGTACCTGTAGGCGT‑GGGTTTACCCGCGAAGAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGACATTGAACTCCCCTGGTTCGGCAACCCG > 1:793418/1‑150 GTGCTGCAGAGTACCTGTAGGCGC‑GGGTTTACCCGCGAAGAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGC < 1:586752/112‑1 GTGCTGCAGAGTACCTGTAGGCGC‑GGGTTTACCCGCGAAGAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGC > 2:586752/1‑112 TAGGCGC‑GGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGG > 2:1129580/1‑86 TAGGCGC‑GGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGG < 1:1129580/86‑1 GGCGC‑GGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGACATTGAACTCCCCTGGTTCGGCAACCCGCTGCAACTGGCCATTGTAG > 1:1296100/1‑150 gcgcgGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGACATTGAACTCCCCTGGTTCGGCAACCCGCTGCAACTGGCCATTGTAG < 1:435608/145‑1 GGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTAAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGACATTGAACTCCCCTGGTTCGGCAACCCGCTGCAACTTGCCATTGTAGAACTT > 1:73573/1‑150 CGGGTTGCCGAACCAGGGGAGTTCAATGTCCAGGTAGGGCTGGATTCCCAGGCGGTGCAGCAGCAGAGCTTTGAATTGCTTTGACTGAAAAAGGCCGCCTGTTCCGGCCTTTTCGCGGGTAAAACCGCGCCTACAGGTGCTGCAGAGTACCTGTAGGCGC‑GG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1599017‑1598856‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctgtaggcgc‑ggTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGACATTGAACTCCCCTGGTTCGGCAACCCGCTGCAACTGGCCATTGTAGAACTT > NC_002947/1598894‑1599041 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |