| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1623420 = | 51 (0.970) | 3 (0.060) | 3/236 | NT | 5.7% | intergenic (‑22/+28) | PP_1422/PP_1423 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | 1623441 = | 51 (1.010) | intergenic (‑43/+7) | PP_1422/PP_1423 | hypothetical protein/hypothetical protein | |||||
TCGCGGTGCTCAGCGCCGAGGCGGTGGAAGACGGCCACCTGCACCTGGGCAGCCTCGAAGGCCCGCGCCTGCAGGTGCTGACCCTGCCTTACGAACTGGACCGCGACCGGGAAATCCAGCGCTGACCAGCCTGCCCCACCCCTGTGGCGGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1623572‑1623420‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggggcAGGCTGGTCAGCGCTGGATTTCCCGGTCGCGGTCCAGTTCGTAA > NC_002947/1623441‑1623484 TCGCGGTGCTCAGCGCCGAGGCGGTGGAAGACGGCCACCTGCACCTGGGCAGCCTCGAAGGCCCGCGCCTGCAGGTGCTGACCCTGCCTTACGAACTGGACCGCGACCGGGAAATCCAGCGCTGACCAGCCTGCCCCACCCCTGTGGCGG < 1:1053912/150‑1 CGCGGTGCTCAGCGCCGAGGCGGTGGAAGACGGCCACCTGCACCTGGGCAGCCTCGAAGGCCCGCGCCTGCAGGTGCTGACCCTGCCTTACGAACTGGACCGCGACCGGGAAATCCAGCGCTGACCAGCCTGCCCCACCCCTGTGGCGGG < 1:213118/150‑1 GCGGTGCTCAGCGCCGAGGCGGTGGAAGACGGCCACCTGCACCTGGGCAGCCTCGAAGGCCCGCGCCTGCAGGTGCTGACCCTGCCTTACGAACTGGACCGCGACCGGGAAATCCAGCGCTGACCAGCCTGCCCCACCCCTGTGGCGGGG > 1:496665/1‑150 CGGTGCTCAGCGCCGAGGCGGTGGAAGACGGCCACCTGCACCTGGGCAGCCTCGAAGGCCCGCGCCTGCAGGTGCTGACCCTGCCTTACGAACTGGACCGCGACCGGGAAATCCAGCGCTGACCAGCCTGCCCCACCCCTGTGGCGGGGC < 1:648945/150‑1 CGGTGCTCAGCGCCGAGGCGGTGGAAGACGGCCACCTGCACCTGGGCAGCCTCGAAGGCCCGCGCCTGCAGGTGCTGACCCTGCCTTACGAACTGGACCGCGACCGGGAAATCCAGCGCTGACCAGCCTGCCCCACCCCTGTGGCGGGGC < 2:36140/150‑1 AAGACGGCCACCTGCACCTGGGCAGCCTCGAAGGCCCGCGCCTGCAGGTGCTGACCCTGCCTTACGAACTGGACCGCGACCGGGAAATCCAGCGCTGACCAGCCTGCCCCGCCACAGGGGTGGGGCAGGCTGGTCAGCGCTGGATTTCCC < 1:1264419/150‑1 AAGGCCCGCGCCTGCAGGTGCTGACCCTGCCTTACGAACTGGACCGCGACCGGGAAATCCAGCGCTGACCAGCCTGCCCCGCCACAGGGGTGGGGCAGGCTGGT < 1:1267678/104‑1 AAGGCCCGCGCCTGCAGGTGCTGACCCTGCCTTACGAACTGGACCGCGACCGGGAAATCCAGCGCTGACCAGCCTGCCCCGCCACAGGGGTGGGGCAGGCTGGT > 2:1267678/1‑104 GCAGGCTGGTCAGCGCTGGATTTCCCGGTCGCGGTCCAGTTCGTAA > 1:406867/1‑46 GCAGGCTGGTCAGCGCTGGATTTCCCGGTCGCGGTCCAGTTCGTAA < 2:406867/46‑1 TCGCGGTGCTCAGCGCCGAGGCGGTGGAAGACGGCCACCTGCACCTGGGCAGCCTCGAAGGCCCGCGCCTGCAGGTGCTGACCCTGCCTTACGAACTGGACCGCGACCGGGAAATCCAGCGCTGACCAGCCTGCCCCACCCCTGTGGCGGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1623572‑1623420‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggggcAGGCTGGTCAGCGCTGGATTTCCCGGTCGCGGTCCAGTTCGTAA > NC_002947/1623441‑1623484 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |