| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1739830 | 53 (1.010) | 5 (0.100) | 5/234 | NT | 9.0% | intergenic (‑22/+35) | PP_1534/PP_1535 | hypothetical protein/putative Methyltransferase |
| ? | NC_002947 | = 1739838 | 51 (1.020) | intergenic (‑30/+27) | PP_1534/PP_1535 | hypothetical protein/putative Methyltransferase | |||||
ATTTGATGCATTCCCCCATCTACCTGGCAGATGAAGTACTCGCCGTCACCAACGACGATGCTGAGTTTCCCGGGATCTGCTTCATGGCCTTTTTCGTCGATGACCCAAGGGCCTGGCTTGTGTTTCGTCATGGCAATAGCTCTCCATGCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1739678‑1739830‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgcCGACATG‑C‑GCGGGCATGGAGAGCTATTGCCATGACGAAACACAAGCCAGGCCCTTGGGTCATCGACGAAAAAGGCCATGAAGCAGATCCCGGGAAACTCAGCATCGTCGTTGGTGACGGCGAGTACTTCATCTGCCAGGTAGATGGGG < NC_002947/1739838‑1739691 ATTTGATGCATTCCCCCATCTACCTGGCAGATGAAGTACTCGCCGTCACCAACGACGATGCTGAGTTTCCCGGGATCTGCTTCATGGCCTTTTTCGTCGATGACCCAAGGGCCTGGCTTGTGTTTCGTCATGGCAATAGCTCTCCATGCC > 2:864555/1‑150 TTTGATGCATTCCCCCATCTACCTGGCAGATGAAGTACTCGCCGTCACCAACGACGATGCTGAGTTTCCCGGGATCTGCTTCATGGCCTTTTTCGTCGATGACCCAAGGGCCTGGCTTGTGTTTCGTCATGGCAATAGCTCTCCATGCCC > 2:1375658/1‑150 CAACGACGATGCTGAGTTTCCCGGGATCTGCTTCATGGCCTTTTTCGTCGATGACCCAAGGGCCTGGCTTGTGTTTCGTCATGGCAATAGCTCTCCATGCCCGCCGACATG‑C‑GCGGGCATGGAG > 1:655704/1‑124 CAACGACGATGCTGAGTTTCCCGGGATCTGCTTCATGGCCTTTTTCGTCGATGACCCAAGGGCCTGGCTTGTGTTTCGTCATGGCAATAGCTCTCCATGCCCGCCGACATG‑C‑GCGGGCATGGAG < 2:655704/124‑1 TTTCGTCATGGCAATAGCTCTCCATGCCCG‑CG‑CATGTCGGCGGGCATGGAGAGCTATTGCCATGACGAAACACAAGCCAGGCCCTTGGGTCATCGACGAAAAAGGCCATGAAGCAGATCCCGGGAAACTCAGCATCGTCGTTGGTGACGG > 1:864555/1‑150 ATGGCAATAGCTCTCCATGCCCGCGCATGTC‑G‑GCGGGCATGGAGAGCTATTGCCATGACGAAACACAAGCCAGGCCCTTGGGTCATCGACGAAAAAGGCCATGAAGCAGATCCCGGGAAACTCAGCATCGTCGTTGGTGA > 1:550094/1‑140 ATGGCAATAGCTCTCCATGCCCGCGCATGTC‑G‑GCGGGCATGGAGAGCTATTGCCATGACGAAACACAAGCCAGGCCCTTGGGTCATCGACGAAAAAGGCCATGAAGCAGATCCCGGGAAACTCAGCATCGTCGTTGGTGA < 2:550094/140‑1 CGCCGACATG‑C‑GCGGGCATGGAGAGCTATTGCCATGACGAAACATAAGCCAGGCCCTTGGGTCACCGACGAATAAGGCCATGAAGCAGATCCTGGCGAACTCAGCATCGTCGTTGGTGACGGCGAGTACTTCATCTGCCAGGTAGATGGG < 2:425693/150‑1 GCCGACATG‑C‑GCGGGCATGGAGAGCTATTGCCATGACGAAACACAAGCCAGGCCCTTGGGTCATCGACGAAAAAGGCCATGAAGCAGATCCCGGGAAACTCAGCATCGTCGTTGGTGACGGCGAGTACTTCATCTGCCAGGTAGATGGGG < 2:1087825/150‑1 ATTTGATGCATTCCCCCATCTACCTGGCAGATGAAGTACTCGCCGTCACCAACGACGATGCTGAGTTTCCCGGGATCTGCTTCATGGCCTTTTTCGTCGATGACCCAAGGGCCTGGCTTGTGTTTCGTCATGGCAATAGCTCTCCATGCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1739678‑1739830‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgcCGACATG‑C‑GCGGGCATGGAGAGCTATTGCCATGACGAAACACAAGCCAGGCCCTTGGGTCATCGACGAAAAAGGCCATGAAGCAGATCCCGGGAAACTCAGCATCGTCGTTGGTGACGGCGAGTACTTCATCTGCCAGGTAGATGGGG < NC_002947/1739838‑1739691 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |