| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1899260 = | 56 (1.070) | 16 (0.350) | 10/216 | NT | 25.2% | intergenic (+288/‑232) | PP_t18/PP_1703 | tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase |
| ? | NC_002947 | 1899320 = | 46 (1.000) | intergenic (+348/‑172) | PP_t18/PP_1703 | tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase | |||||
CCTTTGTCGTGAAGTGGTGAGGGCTGTCGACGTTGACAGCCCGGGATGAGGTAGATCAGCAATTTATGGGCCAGCTATACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1899417‑1899260‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgggagcgggcATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTT > NC_002947/1899320‑1899468 CCTTTGTCGTGAAGTGGTGAGGGCTGTCGACGTTGACAGCCCGGGATGAGGTAGATCAGCAATTTATGGGCCAGCTATACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGG < 1:57793/150‑1CCTTTGTCGTGAAGTGGTGAGGGCTGTCGACGTTGACAGCCCGGGATGAGGTAGATCAGCAATTTATGGGCCAGCTATACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGG < 1:412811/150‑1 CTTTGTCGTGAAGTGGTGAGGGCTGTCGACGTTGACAGCCCGGGATGAGGTAGATCAGCAATTTATGGGCCAGCTATACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGG > 2:955013/1‑150 TTTGTCGTGAAGTGGTGAGGGCTGTCGACGTTGACAGCCCGGGATGAGGTAGATCAGCAATTTATGGGCCAGCTATACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGA < 1:1019109/150‑1 cGGGCTGTCAACGTCGACAGCCCGGGATGAGGTAGATCAGCAATTTATGGGCCAGCTATACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGA < 2:1147881/132‑1 cGGGCTGTCAACGTCGACAGCCCGGGATGAGGTAGATCAGCAATTTATGGGCCAGCTATACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGA > 1:1147881/2‑133 GTTGACAGCCCGGGATGAGGTAGATCAGCAATTTATGGGCCAGCTATACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCT > 2:1246335/1‑115 GTTGACAGCCCGGGATGAGGTAGATCAGCAATTTATGGGCCAGCTATACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCT < 1:1246335/115‑1 TCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAA > 2:505496/1‑150 TCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAA > 2:855685/1‑150 CCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAG > 2:1421273/1‑150 CCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGG > 1:1153826/1‑150 CCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGG > 2:308284/1‑150 CCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGG > 2:1119965/1‑150 CCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGG > 2:1001149/1‑150 CCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCA < 1:106841/141‑1 CCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCA > 2:106841/1‑141 CACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCG‑AAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCG > 1:187775/1‑150 ACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTGCCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCG > 2:406547/1‑150 CAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCC > 1:286496/1‑150 AAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCG > 1:831982/1‑150 AAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCG > 2:1160777/1‑150 TGAGGGCGGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCA < 2:1153826/150‑1 GGGCGGCGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCA < 2:286496/150‑1 TACCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGG < 1:308284/150‑1 ACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGC < 1:1001149/150‑1 CCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCC > 2:121934/1‑117 CCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCC < 1:121934/117‑1 TGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCG < 1:141410/150‑1 TGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCG > 1:1318580/1‑150 tttcGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGG < 2:1338091/138‑1 tttcGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGG > 1:1338091/5‑142 tttcGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCAC > 1:364561/5‑100 tttcGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCAC < 2:364561/96‑1 GGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTT > 2:585951/1‑150 CATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTT < 1:1300942/150‑1 CCTTTGTCGTGAAGTGGTGAGGGCTGTCGACGTTGACAGCCCGGGATGAGGTAGATCAGCAATTTATGGGCCAGCTATACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1899417‑1899260‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgggagcgggcATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTT > NC_002947/1899320‑1899468 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |