New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1917264 = | 60 (1.140) | 6 (0.130) | 4/224 | NT | 11.3% | coding (1003/1083 nt) | PP_1718 | EAL domain‑containing diguanylate phosphodiesterase |
? | NC_002947 | 1917343 = | 40 (0.840) | coding (924/1083 nt) | PP_1718 | EAL domain‑containing diguanylate phosphodiesterase |
GAGGCATTGGAAGTGGTGGATGCCGATGGCAGGGGGTGCGGGTTGATTCACAGGGATGCGCTGCCTGTGCCGGCCTATTCGCGGGTGAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGCGAATA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1917417‑1917264 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccgcgaataGGCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTATCGGCCAAACAGCTCCAGCAGCTGCCCGATCGTGGCATTCAAGTGCACTGTCGGTTGTTCA > NC_002947/1917343‑1917490 GAGGCATTGGAAGTGGTGGATGCCGATGGCAGGGGGTGCGGGTTGATTCACAGGGATGCGCTGCCTGTGCCGGCCTATTCGCGGGTGAACCCGCTCCTACGGGGGTGTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGCG > 1:513070/1‑150 GATGCGCTGCCTGTGCCGGCCTATTCGCGGGTGAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGC < 1:759809/95‑1 GATGCGCTGCCTGTGCCGGCCTATTCGCGGGTGAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGC > 2:759809/1‑95 CCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGG > 1:1177053/1‑150 CCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTG < 1:1244595/148‑1 CCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTG > 2:1244595/1‑148 GCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTCACCCGCGAATAGGCCGGCACAGGCAGAGCCCGCCTTTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTAT > 1:385584/1‑150 ttcGCGGGTGAACCCGCGAATAGGCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTATC < 2:1186283/108‑1 ttcGCGGGTGAACCCGCGAATAGGCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTATC > 1:1186283/4‑111 CCCGCGAATAGGCCGGCACAGGCAGCGCATCCCTGTGAATAAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTATCGGCCAAACAGCTCCAGCAGCTGCCCGATCGTGGCATTCAAGTGCACTGTCG > 1:1362038/1‑150 CCGCGAATAGGCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTATCGGCCAAACAGCTCCAGCAGCTGCCCGATCGTGGCATTCAA < 1:59938/138‑1 CCGCGAATAGGCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCAT‑CACCACTTCCAATGCCTCCAGGTGCTGGTATCGGCCAAACAGCTCCAGCAGCTGCCCGATCGTG < 1:721933/129‑1 CCGCGAATAGGCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCAT‑CACCACTTCCAATGCCTCCAGGTGCTGGTATCGGCCAAACAGCTCCAGCAGCTGCCCGATCGTG > 2:721933/1‑129 CCGCGAATAGGCCGACACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTATCGGCCAAACAGCTCCAGCAGCTGCCCGATCGTGGCATTCAA > 2:59938/1‑138 CGCGAATAGGCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTATCGGCCAAACAGCTCCAGCAGCTGCCCGATCGTGGCATTCAAGTGCACTGTCGGT < 2:1036912/150‑1 TAGGCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTATCGGCCAAACAGCTCCAGCAGCTGCCCGATCGTGGCATTCAAGTGCACTGTCGGTTGTTCA < 2:387075/150‑1 TAGGCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTATCGGCCAAACAGCTCCAGCAGCTGCCCGATCGTGGCATTCAAGTGCACTGTCGGTTGTTCA > 2:646187/1‑150 GAGGCATTGGAAGTGGTGGATGCCGATGGCAGGGGGTGCGGGTTGATTCACAGGGATGCGCTGCCTGTGCCGGCCTATTCGCGGGTGAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGCGAATA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1917417‑1917264 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccgcgaataGGCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTATCGGCCAAACAGCTCCAGCAGCTGCCCGATCGTGGCATTCAAGTGCACTGTCGGTTGTTCA > NC_002947/1917343‑1917490 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |