New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1920762 = | 64 (1.220) | 7 (0.140) | 5/232 | NT | 11.1% | coding (158/963 nt) | PP_1720 | alcohol dehydrogenase |
? | NC_002947 | 1920783 = | 52 (1.050) | coding (179/963 nt) | PP_1720 | alcohol dehydrogenase |
CCGGCAATACGTGACGGGCATCGACCACCACTTCCTCGGCCATGGCGCCGCTGGCCAGCAGGGCGCAAACGCGGTCACCCACGCGCCAGGCGGCACCAGCCCCCACCTCTTCAACCACCCCGGAACACTCCAGCCCCATGTAT‑GGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1920911‑1920762 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggctggAGTGTTCCGGGGTGGTTGAAGAGGTGGGGGCTGGTGCCGCCTGGCGCGTGGGTGACCGCGTTTGCGCCCTGCTGGCCAGCGGCGCCATGGCCGAGGAAGTGGTGGTCGATGCCCGTCACGTATTGCCGGTACCCGAAGGCCTTGGCC > NC_002947/1920783‑1920929 CCGGCAATACGTGACGGGCATCGACCACCACTTCCTCGGCCATGGCGCCGCTGGCCAGCAGGGCGCAAACGCGGTCACCCACTCGCCAGGCGGCACCAGCCCCCCCCTCTTCAACCACCCCGGAACACTCCAGCCCCATGTAT‑GGGCTGG < 2:985472/150‑1 GGCATCGACCACCACTTCCTCGGCCATGGCGCCGCTGGCCAGCAGGGCGCAAACGCGGTCACCCACGCGCCAGGCGGCACCAGCCCCCACCTCTTCAACCACCCCGGAACACTCCAG‑CCCATACATGGGGCTGGAGTGTTCCGGGGTGGT < 2:1415713/150‑1 TCGGCCATGGCGCCGCTGGCCAGCAGGGCGCAAACGCGGTCACCCACGCGCCAGGCGGCACCAGCCCCCACCTCTTCAACCACCCCGGAACACTCCAGCCCCATGTAT‑GGGCTGG < 1:252914/115‑1 TCGGCCATGGCGCCGCTGGCCAGCAGGGCGCAAACGCGGTCACCCACGCGCCAGGCGGCACCAGCCCCCACCTCTTCAACCACCCCGGAACACTCCAGCCCCATGTAT‑GGGCTGG > 2:252914/1‑115 ACCCACGCGCCAGGCGGCACCAGCCCCCACCTCTTCAACCACCCCGGAACACTCCAG‑CCCATACATGGGGCTGGAGTGTTCCGGGGTGGTTGAAGAGGTGG > 1:12637/1‑101 ACCCACGCGCCAGGCGGCACCAGCCCCCACCTCTTCAACCACCCCGGAACACTCCAG‑CCCATACATGGGGCTGGAGTGTTCCGGGGTGGTTGAAGAGGTGG < 2:12637/101‑1 TCCAGCCCCATGTAT‑GGGCTGGAGTGTTCCGGGGTGGTTGAAGAGGTGGGGGCTGGTGCCGCCTGGCGCGTGGGTGACCGCGTTTGCGCCCTGCTGGCCAGCGGCGCCATGGCCGAGGAAGTGGTGGTCGATGCCCGTCACGTATTGCCG > 1:791273/1‑150 TCCAGCCCCATGTAT‑GGGCTGGAGTGTTCCGGGGTGGTTGAAGAGGTGGGGGCTGGTGCCGCCTGGCGCGTGGGTGACCGCGTTTGCGCCCTGCTGGCCAGCGGCGCCATGGCCGAGGAAGTGGTGGTCGATGCCCGTCACGTATTGCCG > 2:1400224/1‑150 TCCAGCCCCATGTAT‑GGGCTGGAGTGTTCCGGGGTGGTTGAAGAGGTGGGGGCTGGTGCCGCCTGGCGCGTGGGTGACCGCGTTTGCGCCCTGCTGGCCAGCGGCGCCATGGCCGAGGAAGTGGTG > 1:703631/1‑126 TCCAGCCCCATGTAT‑GGGCTGGAGTGTTCCGGGGTGGTTGAAGAGGTGGGGGCTGGTGCCGCCTGGCGCGTGGGTGACCGCGTTTGCGCCCTGCTGGCCAGCGGCGCCATGGCCGAGGAAGTGGTG < 2:703631/126‑1 GGGCTGGAGTGTTCCGGGGTGGTTGAAGAGGTGGGGGCTGGTGCCGCCTGGCGCGTGGGTGACCGCGTTTGCGCCCTGCTGGCCAGCGGCGCCATGGCCGAGGAAGTGGTGGTCGATGCCCGTCACGTATTGCCGGTACCCGAAGGCCTT < 1:1133407/150‑1 GGCTGGAGTGTTCCGGGGTGGTTGAAGAGGTGGGGGCTGGTGCCGCCTGGCGCGTGGGTGACCGCGTTTGCGCCCTGCTGGCCAGCGGCGCCATGGCCGAGGAAGTGGTGGTCGATGCCCGTCACGTATTGCCGGTACCCGAAGGCCTTG < 1:436575/150‑1 CTGGAGTGTTCCGGGGTGGTTGAAGAGGTGGGGGCTGGTGCCGCCTGGCGCGTGGGTGACCGCGTTTGCGCCCTGCTGGCCAGCGGCGCCATGGCCGAGGAAGTGGTGGTCGATGCCCGTCACGTATTGCCGGTACCCGAAGGCCTTGGC < 1:352228/150‑1 TGGAGTGTTCCGGGGGGGTTGAAGAGGTGGGGTCTGGTGCCGCCTGGCGCGTGGGTGACCGCGTTTGCGCCCTGCTGGCCAGCGGCGCCATGGCCGAGGAAGTGGTGGTCGATGCCCGTCACGTATTGCCGGTACCCGAAGGCCTTGGCC > 2:407200/1‑150 GAGTGTTCCGGGGTGGTTGAAGAGGTGGGGGCTGGTGCCGCCTGGCGCGTGGGTGACCGCGTTTGCGCCCTGCTGGCCAGCGGCGCCATGGCCGAGGAAGTGGTGGTCGATGCCCGTCACGTATTG < 1:806543/126‑1 GAGTGTTCCGGGGTGGTTGAAGAGGTGGGGGCTGGTGCCGCCTGGCGCGTGGGTGACCGCGTTTGCGCCCTGCTGGCCAGCGGCGCCATGGCCGAGGAAGTGGTGGTCGATGCCCGTCACGTATTG > 2:806543/1‑126 CCGGCAATACGTGACGGGCATCGACCACCACTTCCTCGGCCATGGCGCCGCTGGCCAGCAGGGCGCAAACGCGGTCACCCACGCGCCAGGCGGCACCAGCCCCCACCTCTTCAACCACCCCGGAACACTCCAGCCCCATGTAT‑GGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1920911‑1920762 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggctggAGTGTTCCGGGGTGGTTGAAGAGGTGGGGGCTGGTGCCGCCTGGCGCGTGGGTGACCGCGTTTGCGCCCTGCTGGCCAGCGGCGCCATGGCCGAGGAAGTGGTGGTCGATGCCCGTCACGTATTGCCGGTACCCGAAGGCCTTGGCC > NC_002947/1920783‑1920929 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |