New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2057866 | 53 (1.010) | 6 (0.140) | 6/198 | NT | 11.5% | intergenic (+39/+89) | PP_1832/PP_1833 | oxidase/hypothetical protein |
? | NC_002947 | = 2057906 | 50 (1.180) | intergenic (+79/+49) | PP_1832/PP_1833 | oxidase/hypothetical protein |
CTGGGTTGAGTTGGGTGATACACCGTTTTGCCTGGCGTTGCGCTTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCC‑‑‑‑‑‑GGCCGCTTCGCGGGTGAACCCGCTCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2057701‑2057866 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgcgggtgaacccgctcctacGACCGACGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAGGAGCGGGTTCACCCGCGAAGCGGCCGGCAATGCGATTACAGCTCGTCGATACCAAGAAATGCCCGCGCAGTCACATCGCCCGTAAACCGCGCCTGCATGCC < NC_002947/2057906‑2057762 CTGGGTTGAGTTGGGTGATACACCGTTTTGCCTGGCGTTGCGCTTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCC‑‑‑‑‑‑GGCCGCTTCGCGG > 1:144473/1‑150 GGTTGAGTTGGGTGATACACCGTTTTGCCTGGCGTTGCGCTTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCC‑‑‑‑‑‑GGCCGCTTCGCGGGTG > 1:283022/1‑150 GTTGAGTTGGGTGATACACCGTTTTGCCTGGCGTTGCGCTTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATGGACGAGCTGTAATCGCATTGCC‑‑‑‑‑‑GGCCGCTTCGCGGGTGA > 1:373129/1‑150 GGGTGATACACCGTTTTGCCTGGCGTTGCGCTTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGGTGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCC‑‑‑‑‑‑GGCCGCTTCGCGGGTGAACCCGCTC < 2:502185/150‑1 GATACACCGTTTTGCCTGGCGTTGCGCTTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCC‑‑‑‑‑‑GGCCGCTTCGCGGGTGAACCCGCTCCTAC < 1:608594/150‑1 TGGCGTTGCGCTTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCCTGAACTGGCCTCTTCGCGGGTGAACCCGCTCCTACGACCGACGGT > 2:1205454/1‑150 TTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCC‑‑‑‑‑‑GGCCGCTTCGCGG > 2:564878/1‑107 TTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCC‑‑‑‑‑‑GGCCGCTTCGCGG < 1:564878/107‑1 TGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCC‑‑‑‑‑‑GGCCGCTTCGCGGGTGAACCCGCTCCTACGACCGACGGTTGCGCCGCCCTTAGGCATCGCG > 2:1427598/1‑150 GCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCC‑‑‑‑‑‑GGCCGCTTCGCGGGTGAACCCGCTCCTACGACCGACGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAGGA < 1:1306643/150‑1 ATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCC‑‑‑‑‑‑GGCCGCTTCGCGGGTTCACCCGCgaa < 2:785878/99‑4 ATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCC‑‑‑‑‑‑GGCCGCTTCGCGGGTTCACCCGCgaa < 2:785839/99‑4 ATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCC‑‑‑‑‑‑GGCCGCTTCGCGGGTTCACCCGCgaa > 1:785878/1‑96 ATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCC‑‑‑‑‑‑GGCCGCTTCGCGGGTTCACCCGCgaa > 1:785839/1‑96 GCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCC‑‑‑‑‑‑GGCCGCTTCGCGGGTGAACCCGCTCCTACGACCGACGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAGGAGCGG < 1:1427598/150‑1 AGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCC‑‑‑‑‑‑GGCCGCTTCGCGGGTTCACCCGCgaag > 1:731233/1‑92 AGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCC‑‑‑‑‑‑GGCCGCTTCGCGGGTTCACCCGCgaag < 2:731233/96‑5 GCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCCTGAACTGGCCTCTTCGCGGGTGAACCCGCTCCTACGACCGACGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAGGAGC < 1:1205454/150‑1 CGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCT‑‑‑‑‑‑GGCCTCTTCGCGGGTGAACCCGCTCCTACGACCGACGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAGGAGCGGGTTCA < 1:818099/150‑1 TCGCGGGTGAACCCGCTCCTACGACCGACGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAGGAGCGGGTTCACCCGCGAAGCGGCCGGCAATGCGATTACAGCTCGTCGATACCAAGAAATGCCCGCGCAGTCACATCGCCCGTA < 2:241061/150‑1 CGGGTGAACCCGCTCCTACGACCGACGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAGGAGCGGGTTCACCCGCGAAGCGGCCGGCAATGCGATTACAGCTCGTCGATACCAAGAAATGCCCGCGCAGTCACATCGCCCGTAAAC < 2:1174945/150‑1 TGAACCCGCTCCTACGACCGACGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAGGAGCGGGTTCACCCGCGAAGCGGCCGGCAATGCGATTACAGCTCGTCGATACCAAGAAATGCCCGCGCAGTCACATCGCCCGTAAACCGCG > 1:355187/1‑150 AACCCGCTCCTACGACCGACGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAGGAGCGGGTTCACCCGCGAAGCGGCCGGCAATGCGATTACAGCTCGTCGATACCAAGAAATGCCCGCGCAGTCACATCGCCCGTAAACCGCGCC < 2:480785/150‑1 GCTCCTACGACCGACGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAGGAGCGGGTTCACCCGCGAAGCGGCCGGCAATGCGATTACAGCTCGTCGATACCAAGAAATGCCCGCGCAGTCACATCGCCCGTAAACCGCGCCTGCAT > 1:607804/1‑150 CCTACGACCTACGGTTGCTCCTCCCATAGGCATCGCGCAGTCAATGTAGGAGCGGGTTCACCCGCTAATCGGCCGCTAACGCGATTACAGCTCGTCGATACCAAGAAATGCCCGCGCAGTCACATCGCCCGTAAACCGCGCCTGCATGCC < 1:192994/150‑1 CCTACGACCGACGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAGGAGCGGGTTCACCCGCGAAGCGGCCGGCAATGCGATTACAGCTCGTCGATACCAAGAAATGCCCGCGCAGTCACATCGCCCGTAAACCGCGCCTGCATGCC < 1:802393/150‑1 CTGGGTTGAGTTGGGTGATACACCGTTTTGCCTGGCGTTGCGCTTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCC‑‑‑‑‑‑GGCCGCTTCGCGGGTGAACCCGCTCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2057701‑2057866 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgcgggtgaacccgctcctacGACCGACGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAGGAGCGGGTTCACCCGCGAAGCGGCCGGCAATGCGATTACAGCTCGTCGATACCAAGAAATGCCCGCGCAGTCACATCGCCCGTAAACCGCGCCTGCATGCC < NC_002947/2057906‑2057762 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |