New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2087064	NA (NA)	11 (0.220)	10/236	NT	NA	coding (1136/1302 nt)	PP_1865	transposase
	?	NC_002947	= 2087083	NA (NA)					coding (1155/1302 nt)	PP_1865	transposase

AGCGAAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2086911‑2087064 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggc‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAGGCTTCCCAATTCTCGGGCAAGGCATCGC  <  NC_002947/2087083‑2086935                                                                                                                                                                                                                                                                                                                  AGCGAACTGTTGAACAGGCTCACCGCGATGCCTTGCCCGCGCATTGGGAAGCCTCGATCTATCACTTGGCGGCGCCGGGCAGAGGGGGTTACTAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACC                                                                                                                                                            <  1:319304/150‑1  GCGAAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCT                                                                                                                                                           >  1:214115/1‑150   CGAAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTG                                                                                                                                                          >  1:814944/1‑150   CGAAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTG                                                                                                                                                          >  1:1374824/1‑150    GAAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGG                                                                                                                                                         <  1:1049412/150‑1    GAAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGG                                                                                                                                                         <  1:789119/150‑1    GAAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGG                                                                                                                                                         <  2:745737/150‑1    GAAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGG                                                                                                                                                         <  2:1050829/150‑1    GAAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGAGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGG                                                                                                                                                         <  1:555416/150‑1          TTGAACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGC‑CAGCT                                                                                                                                                  >  2:1121490/1‑150             AACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGC‑CAGCTCCA                                                                                                                                               >  1:1105383/1‑150                AGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGG                                                                                                                                                         <  1:713620/138‑1                AGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGG                                                                                                                                                         >  2:713620/1‑138                            ATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGC‑CAGCTCCAGCAGGCGCTGAGCCA                                                                                                                                <  1:1121490/150‑1                             ggctTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGC‑CAGCTCCAGCAGGCGCTGAGCCAG                                                                                                                               <  2:154526/146‑1                                      CGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGC‑CAGCTCCAGCAGGCGCTGAGCCAG                                                                                                                               >  2:419343/1‑141                                      CGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGC‑CAGCTCCAGCAGGCGCTGAGCCAG                                                                                                                               <  2:845506/141‑1                                      CGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGC‑CAGCTCCAGCAGGCGCTGAGCCAG                                                                                                                               >  1:845506/1‑141                                      CGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGC‑CAGCTCCAGCAGGCGCTGAGCCAG                                                                                                                               <  1:419343/141‑1                                      CGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTG                                                                                                                                                          >  1:6436/1‑115                                      CGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTG                                                                                                                                                          <  2:6436/115‑1                                                     CTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGG                                                                                                                                                         >  2:969267/1‑101                                                     CTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGG                                                                                                                                                         <  1:969267/101‑1                                                              TCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGG                                                                                                                                                         >  1:702783/1‑92                                                              TCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGG                                                                                                                                                         <  2:702783/92‑1                                                                              ATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGC‑CAGCTCCAGCAGGCGCTGAGCCAGG                                                                                                                              >  1:669492/1‑102                                                                              ATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGC‑CAGCTCCAGCAGGCGCTGAGCCAGG                                                                                                                              <  2:669492/102‑1                                                                                                                     TCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGCTCAGCGCCTGCTGGAGCTG‑GCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGA                                       >  2:1105383/1‑150                                                                                                                                 CCCGATGTTCCGATGGAAAACCTGGCTCAGCGCCTGCTGGAGCTG‑GCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAGGCT                           >  1:635494/1‑150                                                                                                                                                  AAACCTGGCTCAGCGCCTGCTGGAGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAGGCTTCCCAA                     >  1:976621/1‑140                                                                                                                                                  AAACCTGGCTCAGCGCCTGCTGGAGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAGGCTTCCCAA                     <  2:976621/140‑1                                                                                                                                                       TGGC‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAGGCTTCCCAATTCTCGGGCAAGGCAT     >  2:214115/1‑150                                                                                                                                                        GGC‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCATAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAGGCTTCCCAATTCTCGGGCAAGGCATC    >  2:1094279/1‑150                                                                                                                                                         GC‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAGGCTTCCCAATTCTCGGGCAAGGCATCG   >  1:424740/1‑150                                                                                                                                                         GC‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAGGCTTCCCAATTCTCGGGCAAGGCATCG   >  1:1267708/1‑150                                                                                                                                                         GC‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAGGCTTCCCAATTCTC                >  2:1203720/1‑137                                                                                                                                                         GC‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAGGCTTCCCAATTCTC                <  1:1203720/137‑1                                                                                                                                                          C‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAGGCTTCCCAATTCTCGGGCAAGGCATCGC  >  1:265419/1‑150                                                                                                                                                          C‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAGGCTTCCCAATTCTCGGGCAAGGCATCGC  >  1:1042093/1‑150                                                                                                                                                          C‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGAT                                  <  2:1244452/118‑1                                                                                                                                                          C‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGAT                                  >  1:1244452/1‑118                                                                                                                                                          C‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGAGATAGATCGAGGCTTCCCAATTCTCGGGCAAGGCATCGC  >  2:848736/1‑150                                                                                                                                                                                                                                                                                                                  AGCGAAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2086911‑2087064 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggc‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAGGCTTCCCAATTCTCGGGCAAGGCATCGC  <  NC_002947/2087083‑2086935

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.