New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2574385 =	66 (1.260)	4 (0.080)	4/234	NT	5.9%	coding (1098/1566 nt)	PP_2257	aerotaxis receptor
	?	NC_002947	2574435 =	65 (1.300)					coding (1148/1566 nt)	PP_2257	aerotaxis receptor

CGCCACTGCGCAGGGCATCGATGATGGCCTGGATGTGCAGGGTGGACTGGCGGGTCTTGTCGGCCAGTGCCCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCCTGCTCGCCCGCACGGGCAGCCTCGATGGCGGCGTTGAGGGCCAGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2574539‑2574385 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcaggGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTG  >  NC_002947/2574435‑2574581                                                                                                                                                                                                                                                                                                                CGCCACTGCGCAGGGCATCGATGATGGCCTGGATGTGCAGGGTGGACTGGCGGGTCTTGTCGGCCAGTGCCCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCCTGCTCGCCCGCACGGGCAGCCTCGATGGCGGCGTTGAGGGCCA                                                                                                                                                          <  2:9582/150‑1    CACTGCGCAGGGCATCGATGATGGCCTGGATGTGCAGGGTGGACTGGCGGGTCTTGTCGGCCAGTGCCCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCCTGCTCGCCCGCACGGGCAGCCTCGATGGCGGCGTTGAGGGCCAGCA                                                                                                                                                       >  1:1347462/1‑150                                             GACTGGCGGGTCTTGTCGGCCAGTGCCCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCCTGCTCGCCCGCACGGGCAGCCTCGATGGCGGCGTTGAGGGCCAGCAGG                                                                                                                                                     <  1:618060/111‑1                                             GACTGGCGGGTCTTGTCGGCCAGTGCCCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCCTGCTCGCCCGCACGGGCAGCCTCGATGGCGGCGTTGAGGGCCAGCAGG                                                                                                                                                     >  2:618060/1‑111                                                                                                         CCCTGCTCGCCAGCACGGGCAGCCTCGATGGCGGCGTTGAGGGCCAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACAT                                                                            >  1:912290/1‑124                                                                                                         CCCTGCTCGCCAGCACGGGCAGCCTCGATGGCGGCGTTGAGGGCCAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACAT                                                                            <  2:912290/124‑1                                                                                                           CTGCTCGCCCGCACGGGCAGCCTCGATGGCGGCGTTGAGGGCCAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCA                                                                    >  1:1185304/1‑130                                                                                                           CTGCTCGCCCGCACGGGCAGCCTCGATGGCGGCGTTGAGGGCCAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCA                                                                    <  2:1185304/130‑1                                                                                                                                                         AGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTG  >  1:1003422/1‑150                                                                                                                                                                                                                                                                                                                CGCCACTGCGCAGGGCATCGATGATGGCCTGGATGTGCAGGGTGGACTGGCGGGTCTTGTCGGCCAGTGCCCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCCTGCTCGCCCGCACGGGCAGCCTCGATGGCGGCGTTGAGGGCCAGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2574539‑2574385 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcaggGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTG  >  NC_002947/2574435‑2574581

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.