| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2844960 = | 55 (1.050) | 4 (0.080) | 4/234 | NT | 6.9% | coding (832/1029 nt) | PP_2496 | hypothetical protein |
| ? | NC_002947 | 2845004 = | 56 (1.120) | coding (788/1029 nt) | PP_2496 | hypothetical protein | |||||
CTTCATGTACCGCATGCGCCACCTGGCTGAACGCAAGGTGCAGTGGCATGAGGCGCTGGGCTTCTTCATGAACGTGATGTGCGAAACCAGCCCGACCGGCGCCCTGCCGGAACAGCTACCCAACGAGCGCGCGCTGCGCAAAGTGCAGGAGCTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2845114‑2844960‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agctgtTCCGGCAGGGCGCCGGTCGGGCTGGTTTCGCACATCACGTTCATGAAGAAGCCCAGCGCCTCATGCCACTGCACCTTGCGTTCAGCCAGGTGGC > NC_002947/2845004‑2845097 CTTCATGTACCGCATGCGCCACCTGGCTGAACGCAAGGTGCAGTGGCATGAGGCGCTGGGCTTCTTCATGAACGTGATGTGCGAAACCAGCCCGACCGGCGCCCTGCCGGAACAGCTACCCAACGAGCGCGCGCTGCGCAAAGTGCAGGA < 1:251694/150‑1CTTCATGTACCGCATGCGCCACCTGGCTGAACGCAAGGTGCAGTGGCATGAGGCGCTGGGCTTCTTCATGAACGTGATGTGCGAAACCAGCCCGACCGGCGCCCTGCCGGAACAGCTACCCAACGAGCGCGCGCTGCGCAAAGTGCAGGA < 1:639456/150‑1 TTCATGTACCGCATGCGCCACCTGGCTGAACGCAAGGTGCAGTGGCATGAGGCGCTGGGCTTCTTCATGAACGTGATGTGCGAAACCAGCCCGACCGGCGCCCTGCCGGAACAGCTACCCAACGAGCGCGCGCTGCGCAAAGTGCAGGAG > 2:210524/1‑150 ATGTACCGCATGCGCCACCTGGCTGAACGCAAGGTGCAGTGGCATGAGGCGCTGGGCTTCTTCATGAACGTGATGTGCGAAACCAGCCCGACCGGCGCCCTGCCGGAACAGCTACCCAACGAGCGCGCGCTGCGCAAAGTGCAGGAGCTG > 1:1052275/1‑150 AGGCGCTGGGCTTCTTCATGAACGTGATGTGCGAAACCAGCCCGACCGGCGCCCTGCCGGAACAGCTACCCAACGAGCGCGCGCTGCGCAAAGTGCAGGAGCT > 1:355584/1‑103 AGGCGCTGGGCTTCTTCATGAACGTGATGTGCGAAACCAGCCCGACCGGCGCCCTGCCGGAACAGCTACCCAACGAGCGCGCGCTGCGCAAAGTGCAGGAGCT < 2:355584/103‑1 GGAACAGCTACCCAACGAGCGCGCGCTGCGCAAAGTGCAGGAGCTGTTCCGGCAGGGCGCCGGTCGGGCTGGTTTCGCACATCACGTTCATGAAGAAGCCCAGCGCCTCATGCCACTGCACCTTGCGTTCAGCCAGGTGGC < 1:1116873/141‑1 GGAACAGCTACCCAACGAGCGCGCGCTGCGCAAAGTGCAGGAGCTGTTCCGGCAGGGCGCCGGTCGGGCTGGTTTCGCACATCACGTTCATGAAGAAGCCCAGCGCCTCATGCCACTGCACCTTGCGTTCAGCCAGGTGGC > 2:1116873/1‑141 AGCTACCCAACGAGCGCGCGCTGCGCAAAGTGCAGGAGCTGTTCCGGCAGGGCGCCGGTCGGGCTGGTTTCGCACATCACGTTCATGAAGAAGCCCAGCGCCTCATGCCACTGCACCTTGCGTTCAGCCAGGT > 1:268744/1‑133 AGCTACCCAACGAGCGCGCGCTGCGCAAAGTGCAGGAGCTGTTCCGGCAGGGCGCCGGTCGGGCTGGTTTCGCACATCACGTTCATGAAGAAGCCCAGCGCCTCATGCCACTGCACCTTGCGTTCAGCCAGGT < 2:268744/133‑1 GTTCCGGCAGGGCGCCGGTCGGGCTGGTTTCGCACATCACGTTCATGAAGAAGCCCAGCGCCTCATGCCACTGCACCTTGCGTTCAGCCAGGTG < 1:825724/94‑1 GTTCCGGCAGGGCGCCGGTCGGGCTGGTTTCGCACATCACGTTCATGAAGAAGCCCAGCGCCTCATGCCACTGCACCTTGCGTTCAGCCAGGTG > 2:825724/1‑94 CTTCATGTACCGCATGCGCCACCTGGCTGAACGCAAGGTGCAGTGGCATGAGGCGCTGGGCTTCTTCATGAACGTGATGTGCGAAACCAGCCCGACCGGCGCCCTGCCGGAACAGCTACCCAACGAGCGCGCGCTGCGCAAAGTGCAGGAGCTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2845114‑2844960‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agctgtTCCGGCAGGGCGCCGGTCGGGCTGGTTTCGCACATCACGTTCATGAAGAAGCCCAGCGCCTCATGCCACTGCACCTTGCGTTCAGCCAGGTGGC > NC_002947/2845004‑2845097 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |