New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2926918 = | 58 (1.100) | 6 (0.120) | 5/232 | NT | 10.0% | coding (142/2472 nt) | PP_2565 | UvrD/REP family helicase |
? | NC_002947 | 2926957 = | 53 (1.070) | coding (181/2472 nt) | PP_2565 | UvrD/REP family helicase |
GAACAAGTTGTCATCCTGGCCTGGCACAGCGGCGCTGTCGGGGCGCGTATCGCGGATCACCAGCACCTGGCGCCCCGCTTCAAAGCCCTCCACCCGACCACGCTCGAACCCTTCACGCACGCCATCGGCATGGCCAGTGCGCTGGCCT‑‑‑‑‑GTGGCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2927073‑2926918 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgtgCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTT > NC_002947/2926957‑2927105 GAACAAGTTGTCATCCTGGCCTGGCACAGCGGCGCTGTCGGGGCGCGTATCGCGGATCACCAGCACCTGGCGCCCCGCTTCAAAGCCCTCCACCCGACCACGCTCGAACCCTTCACGCACGCCATCGGCATGGCCAGTGCGCTGGCCT‑‑‑‑‑GT > 1:643282/1‑150 ACAAGTTGTCATCCTGGCCTGGCACAGCGGCGCTGTCGGGGCGCGTATCGCGGATCACCAGCACCTGGCGCCCCGCTTCAAAGCCCTCCACCCGACCACGCTCGAACCCTTCACGCACGCCATCGGCATGGCCAGTGCGCTGGCCT‑‑‑‑‑GTGG < 1:697901/150‑1 AGTTGTCATCCTGGCCTGGCACAGCGGCGCTGTCGGGGCGCGTATCGCGGATCACCAGCACCTGGCGCCCCGCTTCAAAGCCCTCCACCCGACCACGCTCGAACCCTTCACGCACGCCATCGGCATGGCCAGTGCGCTGGCCT‑‑‑‑‑GTGGCGT > 2:266980/1‑150 GTTGTCATCCTGGCCTGGCACAGCGGCGCTGTCGGGGCGCGTATCGCGGATCACCAGCACCTGGCGCCCCGCTTCAAAGCCCTCCACCCGACCACGAGGGAGCCCTTCACGCACGCCATCGGCATGGCCAGTGCGCTGGCCT‑‑‑‑‑GTGGCGTG > 1:1156269/1‑150 ACGCCATCGGCATGGCCAGTGCGCTGGCCT‑‑‑‑‑GTGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGG < 1:297647/83‑1 ACGCCATCGGCATGGCCAGTGCGCTGGCCT‑‑‑‑‑GTGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGG > 2:297647/1‑83 GCCATCGGCATGGCCAGTGCGCTGGCCT‑‑‑‑‑GTGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGA > 1:1159970/1‑104 GCCATCGGCATGGCCAGTGCGCTGGCCT‑‑‑‑‑GTGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGA < 2:1159970/104‑1 gcgTGGCCAGTGCGCTGGCCTGTGGCGTGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTT > 1:1421532/4‑150 GCATGGCCAGTGCGCTGGCCTGTGGCGTGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTT > 1:704783/1‑150 GTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAG > 1:548142/1‑150 GTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAG < 2:290498/150‑1 GCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTT < 1:350897/150‑1 GCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTT < 2:730747/150‑1 GAACAAGTTGTCATCCTGGCCTGGCACAGCGGCGCTGTCGGGGCGCGTATCGCGGATCACCAGCACCTGGCGCCCCGCTTCAAAGCCCTCCACCCGACCACGCTCGAACCCTTCACGCACGCCATCGGCATGGCCAGTGCGCTGGCCT‑‑‑‑‑GTGGCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2927073‑2926918 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgtgCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTT > NC_002947/2926957‑2927105 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |