New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2927194 =	61 (1.160)	6 (0.110)	6/246	NT	9.0%	coding (418/2472 nt)	PP_2565	UvrD/REP family helicase
	?	NC_002947	2927229 =	60 (1.140)					coding (453/2472 nt)	PP_2565	UvrD/REP family helicase

TTGCCTGCCCCGGCGCCTGCCACCACGCAGGTAGACGGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2927234‑2927194 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGGCAAGTCCACGTCGCTGGTGCTGCGTATCCTGCTGCTGCGTCATTACCTGGGTTACGAGCTGGATGCAATGACCGTGGTCACCTTCACCCGCGAATCGCGCAAG  >  NC_002947/2927229‑2927334                                                                                                                                                     TTGCCTGCCCCGGCGCCTGCCACCACGCAGGTAGACGGGGTAGGCAAGTCCACGTCGCTGGTGCTGCGTATCCTGCTGCTGCGTCATTACCTGGGTTACGAGCTGGATGCAATGACCGTGGTCACCTTCACCCGCGAATCGCGCAAG  >  1:1276016/1‑147 TTGCCTGCCCCGGCGCCTGCCACCACGCAGGTAGACGGGGTAGGCAAGTCCACGTCGCTGGTGCTGCGTATCCTGCTGCTGCGTCATTACCTGGGTTACGAGCTGGATGCAATGACCGTGGTCACCTTCACCCGCGAATCGCGCAAG  <  2:1276016/147‑1     CTGCCCCGGCGCCTGCCACCACGCAGGTAGACGGGGTAGGCAAGTCCACGTCGCTGGTGCTGCGTATCCTGCTGCTGCGTCATTACCTGGGTTACGAGCTGGATGCAATGACCGTGGTCACCTTCACCCGCGAA           <  1:956648/134‑1     CTGCCCCGGCGCCTGCCACCACGCAGGTAGACGGGGTAGGCAAGTCCACGTCGCTGGTGCTGCGTATCCTGCTGCTGCGTCATTACCTGGGTTACGAGCTGGATGCAATGACCGTGGTCACCTTCACCCGCGAA           >  2:956648/1‑134      TGCCCCGGCGCCTGCCACCACGCAGGTAGACGGGGCAGGCAAGTCCACGTCGCTGGTGCTGCGT                                                                                >  1:538804/1‑64      TGCCCCGGCGCCTGCCACCACGCAGGTAGACGGGGCAGGCAAGTCCACGTCGCTGGTGCTGCGT                                                                                <  2:538804/64‑1                                                                                                                                                     TTGCCTGCCCCGGCGCCTGCCACCACGCAGGTAGACGGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2927234‑2927194 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGGCAAGTCCACGTCGCTGGTGCTGCGTATCCTGCTGCTGCGTCATTACCTGGGTTACGAGCTGGATGCAATGACCGTGGTCACCTTCACCCGCGAATCGCGCAAG  >  NC_002947/2927229‑2927334

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.