| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2931522 = | 60 (1.140) | 4 (0.080) | 3/226 | NT | 7.2% | coding (2623/4890 nt) | PP_2566 | leucine‑rich repeat‑containing protein |
| ? | NC_002947 | 2931613 = | 48 (0.990) | coding (2532/4890 nt) | PP_2566 | leucine‑rich repeat‑containing protein | |||||
CGTCTGACAAACGGACGAGTGCCGCTTCGCATTGCCGAGGAAGCACGCCTTCTGCAAGCTCGAGCGCGGCTTGATCGTGCCCTCCTCGGCCTGTTCAGGCCCAGCCTGGCCAACGACGACAGTCTACGCATCAAGCAGGCGCTGCAAGCCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2931675‑2931522‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caagccgcgcTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTCAGACGTTCCCGTTCGGCGTTGCTGATGTTGGCAAGCAACTCTTCAAGCGCGCTGTCCGGCAGCCCGGGAAACTGCCGGGCGAGGGTTT > NC_002947/2931613‑2931758 CGTCTGACAAACGGACGAGTGCCGCTTCGCATTGCCGAGGAAGCACGCCTTCTGCAAGCTCGAGCGCGGCTTGATCGTGCCCTCCTCGGCCTGTTCAGGCCCAGCCTGGCCAACGACGACAGTCTACGCATCAAGCAGGCGCTGCAAGCC < 1:1194402/150‑1 TCTGACAAACGGACGAGTGCCGCTTCGCATTGCCGAGGAAGCACGCCTTCTGCAAGCTCGAGCGCGGCTTGATCGTGCCCTCCTCGGCCTGTTCAGGCCCAGCCTGGCCAACGACGACAGTCTACGCATCAAGCAGGCGCTGCAAGCCGC < 2:1385133/150‑1 gGACAAACGGACGAGTGCCGCTTCGCATTGCCGAGGAAGCACGCCTTCTGCAAGCTCGAGCGCGGCTTGATCGTGCCCTCCTCGGCCTGTTCAGGCCCAGCCTGGCCAACGACGACAGTCTACGCATCAAGCAGGCGCTGCAAGCCGCGC > 2:977291/2‑150 GCGCGGCTTGATCGTGCCCTCCTCGGCCTGTTCAGGCCCAGCCTGGCCAACGACGACAGTCTATGCATCAAGCAGGCGCTGCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTCA > 2:1368678/1‑150 GCGCGGCTTGATCGTGCCCTCCTCGGCCTGTTCAGGCCCAGCCTGGCCAACGACGACAGTCTACGCATCAAGCAGGCGCTGCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTCA > 2:1325668/1‑150 GCTTGATCGTGCCCTCCTCGGCCTGTTCAGGCCCAGCCTGGCCAACGACGACAGTCTATGCATCAAGCAGGCGCTGCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTCAGACGT < 1:1368678/150‑1 CAACGACGACAGTCTACGCATCAAGCAGGCGCTGCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTCAGACGTTCCCGTTCGGCGTTGCTGATGTTGGCAAGCAACTCTTCAAGC < 1:1325668/150‑1 CGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTCAGACGTTCCCGTTCGGTGCGGTTGATGTTGGCAAGCAACTCTTCAAGCGCGCTGTCCGGCAGCCCGGGAAACTGCCGGGCGAGGGTT > 1:88307/1‑150 GCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTCAGACGTTCCCTTTCGGCGTTGCTGATGTTGGCAAGCAACTCTTCAAGCGCGCTGTCCGGCAGCCCGGGAAACTGCCGGGCGAGGGTTT < 1:754187/150‑1 GCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTCAGACGTTCCCGTTCGGCGTTGCTGATGTTGGCAAGCAACTCTTCAAGCGCGCTGTCCGGCAGCCCGGGAAACTGCCGGGCGAGGGTTT < 2:1315596/150‑1 GCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTCAGACGTTCCCGTTCGGCGTTGCTGATGTTGGCAAGCAACTCTTCAAGCGCGCTGTCCGGCAGCCCGGGAAACTGCCGGGCGAGGGTTT > 2:323516/1‑150 CGTCTGACAAACGGACGAGTGCCGCTTCGCATTGCCGAGGAAGCACGCCTTCTGCAAGCTCGAGCGCGGCTTGATCGTGCCCTCCTCGGCCTGTTCAGGCCCAGCCTGGCCAACGACGACAGTCTACGCATCAAGCAGGCGCTGCAAGCCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2931675‑2931522‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caagccgcgcTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTCAGACGTTCCCGTTCGGCGTTGCTGATGTTGGCAAGCAACTCTTCAAGCGCGCTGTCCGGCAGCCCGGGAAACTGCCGGGCGAGGGTTT > NC_002947/2931613‑2931758 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |