New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2961076 =	56 (1.070)	4 (0.080)	4/236	NT	6.9%	coding (159/2316 nt)	PP_2590	ferric siderophore receptor
	?	NC_002947	2961116 =	55 (1.090)					coding (119/2316 nt)	PP_2590	ferric siderophore receptor

CATTTGCCTTACTTCTTCGCTTTTTAAATGCAAAAACACAACCCGCCATCTGTCCCTCTGGAGCCATCGCGTGTCCATCCGTACCTTGCACACACTCTCGTCCCCTGCCCTGGCATTGCCTGCGCTGCCGCGCACCCCGCTGGCACATGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2961226‑2961076 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgccAGGGCAGGGGACGAGAGTGTGTGCAAGGTACGGATGGACACGCGATGGCTCCAGAGGGACAGATGGCGGGTTGTGTTTTTGCATTTAAAAAGCGAAGAAGTAAGGCAAATGAGAATCACGTGCTAACGCAGTGGCAGGCATTTGCAAAA  >  NC_002947/2961116‑2961264                                                                                                                                                                                                                                                                                                              CATTTGCCTTACTTCCTCGCTTTTTAAATGCAAAAACACAACCCGCCATCTGTCCCTCTGGAGCCATCGCGTGTCCATCCGTACCTTGCACACACTCTCGTCCCCTGCCCTGGCATTGCCTGCGCTGCCTCGCACCCCGCTGGCACATGC                                                                                                                                                        <  1:1209184/150‑1                     TTTTTAAATGCAAAAACACAACCCGCCATCTGTCCCTCTGGAGCCATCGCGTGTCCATCCGTACCTTGCACACACTCTCGTCCCCTGCCCTGGCATTGCCTGCGCTGCCGCGCACCCCGCTGGCACATGC                                                                                                                                                        <  1:780226/130‑1                     TTTTTAAATGCAAAAACACAACCCGCCATCTGTCCCTCTGGAGCCATCGCGTGTCCATCCGTACCTTGCACACACTCTCGTCCCCTGCCCTGGCATTGCCTGCGCTGCCGCGCACCCCGCTGGCACATGC                                                                                                                                                        >  2:780226/1‑130                                                                                                       CCCTGCCCTGGCATTGCCTGCGCTGCCGCGCACCCCGCTGGCACATGCCAGGGCAGGGGACGAGAGTGTGTGCAAGGTACGGATGGACACGCGATGGCTCCAGAGGGACAGATGGCGGGTTGTGTTTTTGCATTTAAAAAGCGAAGAAGT                                                  >  1:334575/1‑150                                                                                                              CTGGCATTGCCTGCGCTGCCGCGCACCCCGCTGGCACATGCCAGGGCAGGGGACGAGAGTGTGTGCAAGGTACGGATGGACACGCGATGGCTCCAGAGGGACAGATGGCGGGTT                                                                               <  1:75470/114‑1                                                                                                              CTGGCATTGCCTGCGCTGCCGCGCACCCCGCTGGCACATGCCAGGGCAGGGGACGAGAGTGTGTGCAAGGTACGGATGGACACGCGATGGCTCCAGAGGGACAGATGGCGGGTT                                                                               >  2:75470/1‑114                                                                                                                  CATTGCCTGCGCTGCCGCGCACCCCGCTGGCACATGCCAGGGCAGGGGACGAGAGTGTGTGCAAGGTACGGATGGACACGCGATGGCTCCAGAGGGACAGATGGCGGGTTGTGTTTTTGCATTTAAAAAGCGAAGAAGTAAGGCAAATGA                                       <  2:334575/150‑1                                                                                                                                                      CCAGGGCAGGGGACGAGAGTGTGTGCAAGGTACGGATGGACACGCGATGGCTCCAGAGGGACAGATGGCGGGTTGTGTTTTTGCATTTAAAAAGCGAAGAAGTAAGGCAAATGAGAATCACGTGCTAACGCAGTGGC                <  1:836583/137‑1                                                                                                                                                      CCAGGGCAGGGGACGAGAGTGTGTGCAAGGTACGGATGGACACGCGATGGCTCCAGAGGGACAGATGGCGGGTTGTGTTTTTGCATTTAAAAAGCGAAGAAGTAAGGCAAATGAGAATCACGTGCTAACGCAGTGGC                >  2:836583/1‑137                                                                                                                                                       CAGGGCAGGGGACGAGAGTGTGTGCAAGGTACGGATGGACACGCGATGGCTCCAGAGGGACAGATGGCGGGTTGTGTTTTTGCATTTAAAAAGCGAAGAAGTAAGGCAAATGAGAATCACGTGCTAACGCAGTGGCAGGCATTTGCAAAA  >  2:1097304/1‑150                                                                                                                                                                                                                                                                                                              CATTTGCCTTACTTCTTCGCTTTTTAAATGCAAAAACACAACCCGCCATCTGTCCCTCTGGAGCCATCGCGTGTCCATCCGTACCTTGCACACACTCTCGTCCCCTGCCCTGGCATTGCCTGCGCTGCCGCGCACCCCGCTGGCACATGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2961226‑2961076 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgccAGGGCAGGGGACGAGAGTGTGTGCAAGGTACGGATGGACACGCGATGGCTCCAGAGGGACAGATGGCGGGTTGTGTTTTTGCATTTAAAAAGCGAAGAAGTAAGGCAAATGAGAATCACGTGCTAACGCAGTGGCAGGCATTTGCAAAA  >  NC_002947/2961116‑2961264

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.