| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3129427 | 39 (0.740) | 4 (0.080) | 4/226 | NT | 9.0% | coding (631/1410 nt) | dmoA‑I | dimethyl‑sulfide monooxygenase |
| ? | NC_002947 | = 3129506 | 45 (0.930) | coding (710/1410 nt) | dmoA‑I | dimethyl‑sulfide monooxygenase | |||||
ACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAGGGAGCTGGGAAGAGGGCGCTGTGCTGCGGGATCGCGAGCGCGGCATTTTCAGCGATCCGAACAAGGTTCATGAGATCCGCCACCAGGGCAAGCACTTTCAGGTGCCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3129275‑3129427‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcccggca‑‑‑‑‑‑‑‑‑GCGAAGTCCTTGCCACGGCTCGACGCCCCCGCCTGATAGAGCACCGGCGTGCGCTGTGGCGAAGGCTCGCAAAGATGGATGCCGGGCACCTGAAAGTGCTTGCCCTGGTGGCGGATCTCATGAACCTTGTTCGGATCGCTGAAAATGCC < NC_002947/3129506‑3129358 ACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAGGGAGCTGGGAAGAGGGCGCTGTGCTGCGGGATCGCGAGCGCGGCATTTTCAGCGATCCGAACAAGGTTCATGAGATCCGCCACCAGGGCAAGCACTTTCAGGTGCCCG < 1:1241074/150‑1ACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAGGGAGCTGGGAAGAGGGCGCTGTGCTGCGGGATCGCGAGCGCGGCATTTTCAGCGATCCGAACAAGGTTCATGAGATCCGCCACCAGGGCAAGCACTTTCAGGTGCCCG < 2:965027/150‑1 CGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAGGGAGCTGGGAAGAGGGCGCTGTGCTGCGGGATCGCGAGCGCGGCATTTTCAGCGATCCGAACAAGGTTCATGAGATCCGCCACCAGGGCAAGCACTTTCAGGTGCCCGG > 1:79670/1‑150 GAAGAGGGCGCTGTGCTGCGGGATCGCGAGCGCGGCATTTTCAGCGATCCGAACAAGGTTCATGAGATCCGCCACCAGGGCAAGCACTTTCAGGTGCCCGGCA‑‑‑‑‑‑‑‑‑GCGAAGTCCTTGCCACGGCTCGACGCCCCCGCCTGATAGAGCACCGG > 1:866022/1‑150 TCAGCGATCCGAACAAGCTTCATGAGCTCCGCCACCAGGGCAAGCACTTTCAGGTGCCCGGCATCCATCTTTGCGAAGTCCTTGCCACGGCTCGACGCCCCCGCCTGATAGAGCACCGGCGTGCGCTGTGGCGAAGGCTCGCAAAGATGG < 1:1161066/150‑1 GATCCGAACAAGGTTCATGAGATCCGCCACCAGGGCAAGCACTTTCAGGTGCCCGGCA‑‑‑‑‑‑‑‑‑GCGAAGTCCTTGCCACGGCTCGACGCCCCCGCCTGATAGAGCACCGGCGTGCGCTGTGGCGAAGGCTCGCAAAGATGGATGCCGGGCAC < 1:1359685/147‑1 GATCCGAACAAGGTTCATGAGATCCGCCACCAGGGCAAGCACTTTCAGGTGCCCGGCA‑‑‑‑‑‑‑‑‑GCGAAGTCCTTGCCACGGCTCGACGCCCCCGCCTGATAGAGCACCGGCGTGCGCTGTGGCGAAGGCTCGCAAAGATGGATGCCGGGCAC > 2:1359685/1‑147 GTGCCCGGCA‑‑‑‑‑‑‑‑‑GCGAAGTCCTTGCCACGGCTCGACGCCCCCGCCTGATAGAGCACCGGCGTGCGCTGTGGCGAAGGCTCGCAAAGATGGATGCCGGGCACCTGAAAGTGCTTGCCCTGGTGGCGGATCTCATGAACCTTGTTCGGATCGCT < 1:45686/150‑1 GTGCCCGGCA‑‑‑‑‑‑‑‑‑GCGAAGTCCTTGCCACGGCTCGACGCCCCCGCCTGATAGAGCACCGGCGTGCGCTGTGGCGAAGGCTCGCAAAGATGGATGCCGGGCACCTGAAAGTGCTTGCCCTGGTGGCGGATCTCATGAACCTTGTTCGGATCGCT < 2:632299/150‑1 CGGCA‑‑‑‑‑‑‑‑‑GCGAAGTCCTTGCCACGGCTCGACGCCCCCGCCTGATAGAGCACCGGCGTGCGCTGTGGCGAAGGCTCGCAAAGATGGATGCCGGGCACCTGAACGTGCTTGCCCTGGTGGCCGATCTCATGAACCTTGTTCGGATCGCTGAAAA > 2:144552/1‑150 CGGCA‑‑‑‑‑‑‑‑‑GCGAAGTCCTTGCCACGGCTCGACGCCCCCGCCTGATAGAGCACCGGCGTGCGCTGTGGCGAAGGCTCGCAAAGATGGATGCCGGGCACCTGAAAGTGCTTGCCCTGGTGGCGGATCTCATGAACCTTGTTCGGATCGCTGAAAA < 2:363475/150‑1 A‑‑‑‑‑‑‑‑‑GCGAAGTCCTTGCCACGGCTCGACGCCCCCGCCTGATAGAGCACCGGCGTGCGCTGTGGCGAAGGCTCGCAAAGATGGATGCCGGGCACCTGAAAGTGCTTGCCCTGGTGGCGGATCTCATGAACCTTGTTCGGATCGCTGAAAATGCC < 2:1105071/150‑1 A‑‑‑‑‑‑‑‑‑GCGAAGTCCTTGCCACGGCTCGACGCCCCCGCCTGATAGAGCACCGGCGTGCGCTGTGGCGAAGGCTCGCAAAGATGGATGCCGGGCACCTGAAAGTGCTTGCCCTGGTGGCGGATCTCATGAACCTTGTTCGGATCGCTGAAAATGCC < 2:681508/150‑1 ACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAGGGAGCTGGGAAGAGGGCGCTGTGCTGCGGGATCGCGAGCGCGGCATTTTCAGCGATCCGAACAAGGTTCATGAGATCCGCCACCAGGGCAAGCACTTTCAGGTGCCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3129275‑3129427‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcccggca‑‑‑‑‑‑‑‑‑GCGAAGTCCTTGCCACGGCTCGACGCCCCCGCCTGATAGAGCACCGGCGTGCGCTGTGGCGAAGGCTCGCAAAGATGGATGCCGGGCACCTGAAAGTGCTTGCCCTGGTGGCGGATCTCATGAACCTTGTTCGGATCGCTGAAAATGCC < NC_002947/3129506‑3129358 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |