New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3311677	56 (1.070)	4 (0.080)	4/238	NT	7.2%	coding (1348/1392 nt)	gabP‑III	gamma‑aminobutyrate permease
	?	NC_002947	= 3311700	49 (0.960)					coding (1371/1392 nt)	gabP‑III	gamma‑aminobutyrate permease

GGCTGTTCCCGTGGCTGACCTGGGGCGTGATCCTGTTCATCAGCGGCGTACTGGTATTGATGCTGTTCCGCCCGGATCATCGCCTGGAAGTGGTCTCGACGATGGTGCTGGCGGTGTTGGTGGTGTGCTCGGGGGTGCTGGTGACCCGGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3311525‑3311677 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccAGCCACGGCCCCGCCGCGCGCCCGGCGCCGGGTCACCAGCACCCCCGAGCACACCACCAACACCGCCAGCACCATCGTCGAGACCACTTCCAGGCGATGATCCGGGCGGAACAGCATCAATACCAGTACGCCGCTGATGAACAGGATCA  <  NC_002947/3311700‑3311552                                                                                                                                                                                                                                                                                                                GGCTGTTCCCGTGGCTGACCTGGGGCGTGATCCTGTTCATCAGCGGCGTACTGGTATTGATGCTGTTCCGCCCGGATCATCGCCTGGAAGTGGTCTCGACGATGGTGCTGGCGGTGTTGGTGGTGTGCTCGGGGGTGCTGGTGACCCGGC                                                                                                                                                          >  1:522371/1‑150   CTGTTCCCGTGGCTGACCTGGGGCGTGATCCTGTTCATCAGCGGCGTACTGGTATTGATGCTGTTCCGCCCGGATCATCGCCTGGAAGTGGTCTCGACGATGGTGCTGGCGGTGTTGGTGGTGTGCTCGGGGGTGCTGGTGACCCGGCGC                                                                                                                                                        >  1:1418100/1‑150                                                                         CGGATCATCGCCTGGAAGTGGTCTCGACGATGGTGCTGGCGGTGTTGGTGGTGTGCTCGGGGGTGCTGGTGACCCGGCGCCAGCCACGGCCCCGCCGCGCGCCCGG                                                                                                                              <  1:1388612/106‑1                                                                         CGGATCATCGCCTGGAAGTGGTCTCGACGATGGTGCTGGCGGTGTTGGTGGTGTGCTCGGGGGTGCTGGTGACCCGGCGCCAGCCACGGCCCCGCCGCGCGCCCGG                                                                                                                              >  2:1388612/1‑106                                                                                                TCGACGATGGTGCTGGCGGTGTTGGTGGTGTGCTCGGGGGTGCTGGTGACCCGGCGCCAGCCACGGCCCCGCCGCGCGCCCG                                                                                                                               <  1:829207/82‑1                                                                                                TCGACGATGGTGCTGGCGGTGTTGGTGGTGTGCTCGGGGGTGCTGGTGACCCGGCGCCAGCCACGGCCCCGCCGCGCGCCCG                                                                                                                               >  2:829207/1‑82                                                                                                                                                      CGCCAGCCACGGCCCCGCCGCGCGCCCGGCGCCGGGTCACCAGCACCCCCGAGCACACCACCAACACCGCCAGCACCATCGTCGAGACCACTTCCAGGCGATGATCCGGGCGGAACAGCATCAATACCAGTACGCCGCTGATGAACAGGA     <  1:534766/150‑1                                                                                                                                                         CAGCCACGGCCCCGCCGCGCGCCCGGCGCCGGGTCACCAGCACCCCCGAGCACACCACCAACACCGCCAGCACCATCGTCGAGACCACTTCCAGGCGATGATCCGGGCGGAACAGaat                                  >  2:1060168/1‑115                                                                                                                                                         CAGCCACGGCCCCGCCGCGCGCCCGGCGCCGGGTCACCAGCACCCCCGAGCACACCACCAACACCGCCAGCACCATCGTCGAGACCACTTCCAGGCGATGATCCGGGCGGAACAGCATCAATACCAGTACGCCGCTGATGAACAGGATCA  >  1:108422/1‑150                                                                                                                                                                                                                                                                                                                GGCTGTTCCCGTGGCTGACCTGGGGCGTGATCCTGTTCATCAGCGGCGTACTGGTATTGATGCTGTTCCGCCCGGATCATCGCCTGGAAGTGGTCTCGACGATGGTGCTGGCGGTGTTGGTGGTGTGCTCGGGGGTGCTGGTGACCCGGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3311525‑3311677 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccAGCCACGGCCCCGCCGCGCGCCCGGCGCCGGGTCACCAGCACCCCCGAGCACACCACCAACACCGCCAGCACCATCGTCGAGACCACTTCCAGGCGATGATCCGGGCGGAACAGCATCAATACCAGTACGCCGCTGATGAACAGGATCA  <  NC_002947/3311700‑3311552

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.