New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 333918140 (0.760)4 (0.090) 4/202 NT 9.0% intergenic (‑140/+103) PP_2935/ybiT membrane protein/ABC‑F family ATPase
?NC_002947 = 3339225 48 (1.110)intergenic (‑184/+59) PP_2935/ybiT membrane protein/ABC‑F family ATPase

CTGGCGGGGGCTGGTTGTTGCGCGGTCATGGGCTCTTTCGCGGGCGGGCGGTTGGGCGTGGTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3339013‑3339181
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcttcgcgggcttgcccgctcCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGCAAGCCCGCGAAGAGTACATCCCCATCCCACCGACCGGCACGGCCCGACGAATAATTCGTTAGCCTGCTGTCTTTTCCTTCGCGCAACGGCCATGAT  <  NC_002947/3339225‑3339078
                                                                                                                                                                                                                                                                                                                             
CTGGCGGGGGCTGGTTGTTGCGCGGTCATGGGCTCTTTCGCGGGCGGGCGGTTGGGCGTGGTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTC                                                                                                                                                                         <  2:40017/150‑1
   GCGGGGGCTGGTTGTTGCGCGGTCATGGGCTCTTTCGCGGGCGGGCGGTTGGGCGTGGTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTC                                                                                                                                                                      <  2:498073/150‑1
   GCGGGGGCTGGTTGTTGCGCGGTCATGGGCTCTTTCGCGGGCGGGCGGTTGGGCGTGGTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTC                                                                                                                                                                      >  1:932275/1‑150
        GGCTGGTTGTTGCGCGGTCATGGGCTCTTTCGCGGGCGGGCGGTTGGGCGTGGTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGG                                                                                                                                                                 >  2:464308/1‑150
           TGGTTGTTGCGCGGTCATGGGCTCTTTCGCGGGCGGGCGGTTGGGCGTGGTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTT                                                                                                                                                              >  2:675682/1‑150
             GTTGTTGCGCGGTCATGGGCTCTTTCGCGGGCGGGCGGTTGGGCGTGGTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGCCCGTGCCGGTCGGGGGGGTGGGGATGTACTCTTCGCGGGCTTGg                                                                                                                                                            >  2:1402257/1‑149
              TTGTTGCGCGGTCATGGGCTCTTTCGCGGGCGGGCGGTTGGGCGTGGTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCC                                                                                                                                                           <  1:979492/150‑1
              TTGTTGCGCGGTCATGGGCTCTTTCGCGGGCGGGCGGTTGGGCGTGGTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTT                                                                                                                                                                       <  1:391201/138‑1
              TTGTTGCGCGGTCATGGGCTCTTTCGCGGGCGGGCGGTTGGGCGTGGTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTT                                                                                                                                                                       >  2:391201/1‑138
                 TTGCGCGGTCATGGGCTCTTTCGCGGGCGGGCGGTTGGGCGTGGTCCCATCACGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGC                                                                                                                                                        <  1:441605/150‑1
                             GGGCTCTTTCGCGGGCGGGCGGTTGGGCGTGGTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACT                                                                                                                                                                          <  1:473453/120‑1
                             GGGCTCTTTCGCGGGCGGGCGGTTGGGCGTGGTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACT                                                                                                                                                                          >  2:473453/1‑120
                                CTCTTTCGCGGGCGGGCGGTTGGGCGTGGTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTC                                                                                                                                                      <  1:63345/137‑1
                                CTCTTTCGCGGGCGGGCGGTTGGGCGTGGTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTC                                                                                                                                                      >  2:63345/1‑137
                                   TTTCGCGGGCGGGCGGTTGGGCGTGGTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGG                                                                                                                                                                 >  2:590915/1‑123
                                   TTTCGCGGGCGGGCGGTTGGGCGTGGTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGG                                                                                                                                                                 <  1:590915/123‑1
                                                                                                        GAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCG                                                                                                     <  2:657688/114‑1
                                                                                                        GAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCG                                                                                                     >  1:657688/1‑114
                                                                                                             ATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGG                                                                                                    <  2:1012432/110‑1
                                                                                                             ATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGG                                                                                                    >  1:1012432/1‑110
                                                                                                                                                           GGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGTCCTTGGGAGAGCGGGCAAGCCCGCGAAGAGTACATCCCCATCCCACCGACCGGCACGGCCCGACGAATAATTCGTTAGCCTGCTGTCTTTTCCTTCGCGC              >  1:1068739/1‑150
                                                                                                                                                                 GCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGCAAGCCCGCGAAGAGTACATCCCCATCCCACCGACCGGCACGGCCCGACGAATAATTCGTTAGCCTGCTGTCTTTTCCTTCGCGCAACGGC        <  2:1185722/150‑1
                                                                                                                                                                   CCGCTCCCATAGGGACTGCACAGGTATTGGCCGCTGGTGGGGCCTTGGGAGAGCGGGCAAGCCCGCGAAGAGTACATCCCCATCCCACCGACCGGCACGGCCCGACGAATAATTCGTTAGCCTGCTGTCTTTTCCTTCGCGCAACGGCCA      <  2:1313090/150‑1
                                                                                                                                                                   CCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGCAAGCCCGCGAAGAGTACATCCCCATCCCACCGACCGGCACGGCCCGACGAATAATTCGTTAGCCTGCTGTCTTTTCCTTCGCGCAACGGCCA      >  1:820289/1‑150
                                                                                                                                                                    CGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGCAAGCCCGCGAAGAGTACATCCCCATCCCACCGACCGGCACGGCCCGACGAATAATTCGTTAGCCTGCTGTCTTTTCCTTCGCGCAACGGCCAT     <  2:599100/150‑1
                                                                                                                                                                       TCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGCAAGCCCGCGAAGAGTACATCCCCATCCCACCGACCGGCACGGCCCGACGAATAATTCGTTAGCCTGCTGTCTTTTCCTTCGCGCAACGGCCATGAT  <  2:524476/150‑1
                                                                                                                                                                                                                                                                                                                             
CTGGCGGGGGCTGGTTGTTGCGCGGTCATGGGCTCTTTCGCGGGCGGGCGGTTGGGCGTGGTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3339013‑3339181
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcttcgcgggcttgcccgctcCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGCAAGCCCGCGAAGAGTACATCCCCATCCCACCGACCGGCACGGCCCGACGAATAATTCGTTAGCCTGCTGTCTTTTCCTTCGCGCAACGGCCATGAT  <  NC_002947/3339225‑3339078

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.