New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3434911	69 (1.310)	9 (0.180)	9/232	NT	11.9%	coding (103/327 nt)	gpW	baseplate protein
	?	NC_002947	= 3434935	68 (1.370)					coding (127/327 nt)	gpW	baseplate protein

CTGGCCTTCCTGGCTGATCACCCTGAGCTGCAGCGGCTGGACGGCTGACCATGATCGGCCTGGATCGCCGCAACGGCGAAGCTATCTCGGGCCTTGACCACTTGCGCCAATCCATCGAAGACATCTTGACCACGCCACTCGGCAGTCGCCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3434759‑3434911 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgcaGCTTGCTGCCGTATTCCGGCCGCATGCGGCGACTGCCGAGTGGCGTGGTCAAGATGTCTTCGATGGATTGGCGCAAGTGGTCAAGGCCCGAGATAGCTTCGCCGTTGCGGCGATCCAGGCCGATCATGGTCAGCCGTCCAGCCGCTGC  <  NC_002947/3434935‑3434788                                                                                                                                                                                                                                                                                                               CTGGCCTTCCTGGCTGATCACCCTGAGCTGCAGCGGCTGGACGGCTGACCATGATCGGCCTGGATCGCCGCAACGGCGAAGCTATCTCGGGCCTTGACCACTTGCGCCAATCCATCGAAGACATCTTGACCACGCCACTCGGCAGTCGCC                                                                                                                                                         >  1:1228548/1‑150   GGCCTTCCTGGCTGATCACCCTGAGCTGCAGCGGCTGGACGGCTGACCAGGATCGGCCTGGATCGCCGCAACGGCGAAGCTATCTCGGGCCTTGACCACTTGCGCCAATCCATCGAAGACATCTTGACCACGCCACTCGGCAGTCGCCGC                                                                                                                                                       >  2:557705/1‑150    GCCTTCCTGGCTGATCACCCTGAGCTGCAGCGGCTGGACGGCTGACCATGATCGGCCTGGATCGCCGCCACGGCGAAGCTATCTCGGGCCTTGACCACTTGCGCCAATCCATCGAAGACATCTTGACCACGCCACTCGGCAGTCGCCGCA                                                                                                                                                      >  2:1029166/1‑150                      CCTGAGCTGCAGCGGCTGGACGGCTGACCATGATCGGCCTGGATCGCCGCAACGGCGAAGCTATCTCGGGCCTTGACCACTTGCGCCAATCCATCGAAGACATCTTGACCACGCCACTCGGCAGTCGCC‑‑‑GCTTGCTGCCGTATTCCGGCC                                                                                                                                 >  1:1376427/1‑150                              GCAGCGGCTGGACGGCTGACCATGATCGGCCTGGATCGCCGCAACGGCGAAGCTATCTCGGGCCTTGACCACTTGCGCCAATCCATCGAAGACATCTTGACCACGCCACTCGGCAGTCGCC‑‑‑GCTTGCTGCCGTATTCCGGCCGCATGCGG                                                                                                                         <  2:1376427/150‑1                                AGCGGCTGGACGGCTGACCATGATCGGCCTGGATCGCCGCAACGGCGAAGCTATCTCGGGCCTTGACCACTTGCGCCAATCCATCGAAGACATCTTGACCACGCCACTCGGCAGTCGCCG                                                                                                                                                        <  2:772480/120‑1                                AGCGGCTGGACGGCTGACCATGATCGGCCTGGATCGCCGCAACGGCGAAGCTATCTCGGGCCTTGACCACTTGCGCCAATCCATCGAAGACATCTTGACCACGCCACTCGGCAGTCGCCG                                                                                                                                                        <  2:771170/120‑1                                AGCGGCTGGACGGCTGACCATGATCGGCCTGGATCGCCGCAACGGCGAAGCTATCTCGGGCCTTGACCACTTGCGCCAATCCATCGAAGACATCTTGACCACGCCACTCGGCAGTCGCCG                                                                                                                                                        >  1:772480/1‑120                                AGCGGCTGGACGGCTGACCATGATCGGCCTGGATCGCCGCAACGGCGAAGCTATCTCGGGCCTTGACCACTTGCGCCAATCCATCGAAGACATCTTGACCACGCCACTCGGCAGTCGCCG                                                                                                                                                        >  1:771170/1‑120                                                                                 GCTATCTCGGGCCTTGACCACTTGCGCCAATCCATCGAAGACATCTTGACCACGCCACTCGGCAGT‑‑‑CGCAGCTTGCTGCCGTATTCCGGCCGCATGCGGC                                                                                                                        >  2:1190677/1‑100                                                                                 GCTATCTCGGGCCTTGACCACTTGCGCCAATCCATCGAAGACATCTTGACCACGCCACTCGGCAGT‑‑‑CGCAGCTTGCTGCCGTATTCCGGCCGCATGCGGC                                                                                                                        <  1:1190677/100‑1                                                                                                          GCCAATCCATCGAAGACATCTTGACCACGCCACTCGGCAGTCGCCGCAGCTTGCTGCCGTATTCCGGCCGCAT                                                                                                                             <  2:115182/73‑1                                                                                                          GCCAATCCATCGAAGACATCTTGACCACGCCACTCGGCAGTCGCCGCAGCTTGCTGCCGTATTCCGGCCGCAT                                                                                                                             >  1:115182/1‑73                                                                                                                   TCGAAGACATCTTGACCACGCCACTCGGCAGTCGCCGCAGCTTGCTGCCGTATTCCGGCCGCATGCGGCGACTG                                                                                                                   >  1:619655/1‑74                                                                                                                   TCGAAGACATCTTGACCACGCCACTCGGCAGTCGCCGCAGCTTGCTGCCGTATTCCGGCCGCATGCGGCGACTG                                                                                                                   <  2:619655/74‑1                                                                                                                           ATCTTGACCACGCCACTCGGCAGTCGCCGCA‑‑‑TGCGGCCGGAATACGGCAGCAAGCTGCGACTGCCGAGTGGCGTGGTCAAGATGTCTTCGATGGATTTGCGCAAGTGGTCAAGGCCCGAGATAGCTTCGCCGTTGCGGCGATCCAGGCCG                            >  1:307214/1‑150                                                                                                                                                    GCCGCAGCTTGCTGCCGTATTCCGGCCGCATGCGGCGACTGCCGAGTGGCGTGGTCAAGATGTCTTCGATGGATTGGCGCAAGTGGTCAAGGCCCGAGATAGCTTCGCCGTTGCGGCGATCCAGGCCGATCATGGTCAGCCGTCCAGCCG      >  2:1075992/1‑150                                                                                                                                                        CAGCTTGCTGCCGTATTCCGGCCGCATGCGGCGACTGCCGAGTGGCGTGGTCAAGATGTCTTCGATGGATTGGCGCAAGTGGTCAAGGCCCGAGATAGCTTCGCCGTTGCGGCGATCCAGGCCGATCATGGTCAGCCGTCCAGCCGCTGC  >  1:557705/1‑150                                                                                                                                                                                                                                                                                                               CTGGCCTTCCTGGCTGATCACCCTGAGCTGCAGCGGCTGGACGGCTGACCATGATCGGCCTGGATCGCCGCAACGGCGAAGCTATCTCGGGCCTTGACCACTTGCGCCAATCCATCGAAGACATCTTGACCACGCCACTCGGCAGTCGCCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3434759‑3434911 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgcaGCTTGCTGCCGTATTCCGGCCGCATGCGGCGACTGCCGAGTGGCGTGGTCAAGATGTCTTCGATGGATTGGCGCAAGTGGTCAAGGCCCGAGATAGCTTCGCCGTTGCGGCGATCCAGGCCGATCATGGTCAGCCGTCCAGCCGCTGC  <  NC_002947/3434935‑3434788

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.