New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3441520 | 56 (1.070) | 4 (0.080) | 4/238 | NT | 7.3% | coding (236/3270 nt) | PP_3062 | tail length determination protein |
? | NC_002947 | = 3441546 | 48 (0.940) | coding (262/3270 nt) | PP_3062 | tail length determination protein |
GGCATCCAGAAGCTGGAAGCCAAGGGCAACAAGGCCAAGGTGCTGAAAAGCACCATTGGCGAAACCATCAAGCTGCGCGAGGAATGGAAGCGCGCGCACGACAGCGGCGCGGCCGGCGCCGACAAGTTGCTGCGCAAGCTGGACAGCAACCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3441369‑3441520 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctCGATCCCCTGCTTGCGCAACGAATCCAGGTTGCTGTCCAGCTTGCGCAGCAACTTGTCGGCGCCGGCCGCGCCGCTGTCGTGCGCGCGCTTCCATTCCTCGCGCAGCTTGATGGTTTCGCCAATGGTGCTTTTCAGCACCTTGGCCTT < NC_002947/3441546‑3441399 GGCATCCAGAAGCTGGAAGCCAAGGGCAACAAGGCCAAGGTGCTGAAAAGCACCATTGGCGAAACCATCAAGCTGCGCGAGGAATGGAAGCGCGCGCACGACAGCGGCGCGGCCGGCGCCGACAAGTTGCTGCGCAAGCTGGACAGCAAC < 1:1398154/150‑1 TCAAGCTGTGCGAGGAATGGAAGCGCGCGCACGACAGCGGCGCGGCCGGCGCCGACAAGTTGCTGCGCAAGCTGGACAGCAACCTCGATCCCCTGCTTGCGCAACGAATCCAGGTTGCTGTCCAGCTT < 1:941540/128‑1 TCAAGCTGTGCGAGGAATGGAAGCGCGCGCACGACAGCGGCGCGGCCGGCGCCGACAAGTTGCTGCGCAAGCTGGACAGCAACCTCGATCCCCTGCTTGCGCAACGAATCCAGGTTGCTGTCCAGCTT > 2:941540/1‑128 GAATGGAAGCGCGCGCACGACAGCGGCGCGGCCGGCGCCGACAAGTTGCTGCGCAAGCTGGACAGCAACCTCGATCCCCTGCTTGCGCAACGAATCCAGGT < 1:1015754/101‑1 GAATGGAAGCGCGCGCACGACAGCGGCGCGGCCGGCGCCGACAAGTTGCTGCGCAAGCTGGACAGCAACCTCGATCCCCTGCTTGCGCAACGAATCCAGGT > 2:1015754/1‑101 CTCGATCCCCTGCTTGCGCAACGAATCCAGGTTGCTGTCCAGCTTGCGCAGCAACTTGTCGGCGCCGGCCGCGCCGCTGTCGTGCGCGCGCTTCCATTCCTCGCGCAGCTTGATGGTTTCGCCAATGGTGCTTTTCAGCACCTTGGCCTT > 2:749851/1‑150 GGCATCCAGAAGCTGGAAGCCAAGGGCAACAAGGCCAAGGTGCTGAAAAGCACCATTGGCGAAACCATCAAGCTGCGCGAGGAATGGAAGCGCGCGCACGACAGCGGCGCGGCCGGCGCCGACAAGTTGCTGCGCAAGCTGGACAGCAACCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3441369‑3441520 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctCGATCCCCTGCTTGCGCAACGAATCCAGGTTGCTGTCCAGCTTGCGCAGCAACTTGTCGGCGCCGGCCGCGCCGCTGTCGTGCGCGCGCTTCCATTCCTCGCGCAGCTTGATGGTTTCGCCAATGGTGCTTTTCAGCACCTTGGCCTT < NC_002947/3441546‑3441399 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |