| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3464323 | 55 (1.050) | 5 (0.120) | 5/198 | NT | 8.8% | coding (78/1929 nt) | PP_3078 | ABC transporter substrate‑binding protein |
| ? | NC_002947 | = 3464362 | 60 (1.420) | coding (39/1929 nt) | PP_3078 | ABC transporter substrate‑binding protein | |||||
CTTGGGGGCGGAGGGGTTTACATAGTCGAAATGCCGGAAGCTGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3464158‑3464323‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgggagcgggtttacccgcgaaGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCCACAAGTATTGTGGGGGCTTGTATTTTCGTGCATAGGCTTTACGGTCCAGGCCGCTCCCACCCACGCCCTTACGGTCTACGGTGAA < NC_002947/3464362‑3464218 CTTGGGGGCGTCGGGGTTTACATAGTCGAAATGCCGGAAGCTGGCGGCGTAGCGGGGGGCTTCGCCGTAGACCGTGAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCCATGCACGAAAATACAAACCCCCAACATCCTTGCGGttg < 2:1091051/150‑4 GGGGGCGGAGGGGTTTACATAGTCGAAATGCCGGAAGCTGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGG < 2:637911/150‑1 GGCGGAGGGGTTTACATAGTCGAAATGCCGGAAGCTGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTT < 2:1336517/150‑1 TTTACATAGTCGAAATGCCGGAAGCTGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAA < 2:591724/150‑1 GTCGAAATGCCGGAAGCTGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGG < 2:935826/129‑1 GTCGAAATGCCGGAAGCTGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGG < 1:185317/129‑1 GTCGAAATGCCGGAAGCTGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGG > 2:185317/1‑129 GTCGAAATGCCGGAAGCTGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGG > 1:935826/1‑129 CCGGAAGCTGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGT > 2:839230/1‑112 CCGGAAGCTGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGT < 1:839230/112‑1 GCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTG > 2:1002919/1‑100 GCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTG < 1:1002919/100‑1 GCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGC < 2:192159/105‑1 GCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGC > 1:192159/1‑105 ACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGG > 2:668994/1‑150 ACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTG < 2:23600/83‑1 ACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTG > 1:23600/1‑83 AGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAAC < 1:668994/150‑1 AAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCC < 1:983358/150‑1 CACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGG > 2:1365672/1‑97 CACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGG < 1:1365672/97‑1 AGCGGGTTTACCCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCCACAAGTATTGTGGGGGCTTGTATTTTCGTGCATAGGCTTTACGGTCCAGGCCGCTCCCACCCACGCCCTTAC < 1:59427/150‑1 CCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCCACAAGTATTGTAGGGTCGTGTATTTTCGTGCATAGGCTTTACGCTCCAGGACGCTCCCACCCACGCCCTTACGGTCTACGGTG > 1:385352/1‑150 GCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCCACAAGTATTGTATGGGCTTGTATTTGCTTTCATAGGCTTTACGGTCCAGGCCGCTCCCACCCACGCCCTTACGGTCTACGGTGAA < 1:883903/150‑1 AAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCCACAAGTATTGTGGGGGCTTGTATTTTCGTGCATAGGCTTTACGGTCCAGGCCGCTCCCACCCACGCCCTTACGGTCTACG > 1:546398/1‑142 AAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCCACAAGTATTGTGGGGGCTTGTATTTTCGTGCATAGGCTTTACGGTCCAGGCCGCTCCCACCCACGCCCTTACGGTCTACG < 2:546398/142‑1 CTTGGGGGCGGAGGGGTTTACATAGTCGAAATGCCGGAAGCTGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3464158‑3464323‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgggagcgggtttacccgcgaaGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCCACAAGTATTGTGGGGGCTTGTATTTTCGTGCATAGGCTTTACGGTCCAGGCCGCTCCCACCCACGCCCTTACGGTCTACGGTGAA < NC_002947/3464362‑3464218 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |