New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3642161 =	70 (1.330)	5 (0.100)	5/232	NT	8.0%	coding (1087/1431 nt)	PP_3209	isoxanthopterin deaminase
	?	NC_002947	3642226 =	49 (0.990)					coding (1022/1431 nt)	PP_3209	isoxanthopterin deaminase

GTTGCCATGGAGGCCGCAGGCATGTCGGTCTCGATCGGCGTGGATGGCGCTGCCTCCAACGAAGCCTGCGACATGATCAGCGAAACCCACGCCGCCTGGCTAATGCAAAGGGCCAAGGCTGGCGAACGCGCCATGGCCCGCCATGCTGGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3642314‑3642161 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggcg‑‑‑TGGGTTTCGCTGATCATGTCGCAGGCTTCGTTGGAGGCAGCGCCATCCACGCCGATCGAGACCGACATGCCTGCGGCCTCCATGGCAACGATATCTGCGATACCACTGCCAAGCCGGCCATTGCTTTGTGGGCAGTGGGCGATGCCGGT  >  NC_002947/3642226‑3642374                                                                                                                                                                                                                                                                                                                    GTTGCCATGGAGGCCGCAGGCATGTCGGTCTCGATCGGCGTGGATGGCGCTGCCTCCAACGAAGCCTGCGACATGATCAGCGAAACCCACGCCGCCTGGCTAATGCAAAGGGCCAAGGCTGGCGAACGCGCCATGGCCCGCCATGCTGGC                                                                                                                                                              <  2:318315/150‑1  TTGCCATGGAGGCCGCAGGCATGTCGGTCTCGATCGGCGTGGATGGCGCTGCCTCCAACGAAGCCTGCGACATGATCAGCGAAACCCACGCCGCCTGGCTAATGCAAAGGGCCAAGGCTGGCGAACGCGCCATGGCCCGCCATGCTGGtg                                                                                                                                                             >  1:437493/1‑148  TTGCCATGGAGGCCGCAGGCATGTCGGTCTCGATCGGCGTGGATGGCGCTGCCTCCAACGAAGCCTGCGACATGATCAGCGAAACCCACGCCGCCTGGCTAATGCAAAGGGCCAAGGCTGGCGAACGCGCCATGGCCCGCCATGCTGGCG                                                                                                                                                             >  2:455824/1‑150     CCATGGAGGCCGCAGGCATGTCGGTCGCGATCGGCGTGGATGGCGCTGCCTCCAACGAAGCCTGCGACATGATCAGCGAAACCCACGCCGCCTGGCTAATGCAAAGGGCCAAGGCTGGCGAACGCGCCATGGCCCGCCATGCTGGCGGCG                                                                                                                                                          >  1:549642/1‑150                                                                   TGCGACATGATCAGCGAAACCCACGCCGCCTGGCTAATGCAAAGGGCCAAGGTTGGCGAACGCGCCATGGCCCGCCATGCTGGCGGCG‑‑‑TGGGTTTCGCTGATCATGTCGCAGGCTTCGTTGGAGGCAGCGCCATCCACGCCGATCGAGAC                                                                                         >  1:553908/1‑150                                                                         ATGATCAGCGAAACCCACGCCGCCTGGCTAATGCAAAGGGCCAAGGCTGGCGAACGCGCCATGGCCCGCCATGCTGGCGGCGATCTGGAGGGCGGTGCCCATGTCGCAGGCTTCGTTGGAGGCAGCGCCATCCACGCCGATCGAGACCGA                                                                                      >  2:1126277/1‑150                                                                                        CACGCCGCCTGGCTAATGCAAAGGGCCAAGGCTGGCGAACGCGCCATGGCCCGCCATGCTGGCGGCG‑‑‑TGGGTTTCGCTGATCATGTCGCAGGCTTCGTTGGAGGCAGCGCCATCCACGCCGATC                                                                                              <  1:1288987/124‑1                                                                                        CACGCCGCCTGGCTAATGCAAAGGGCCAAGGCTGGCGAACGCGCCATGGCCCGCCATGCTGGCGGCG‑‑‑TGGGTTTCGCTGATCATGTCGCAGGCTTCGTTGGAGGCAGCGCCATCCACGCCGATC                                                                                              >  2:1288987/1‑124                                                                                                       ATGCAAAGGGCCAAGGTTGGCGAACGCGCCATGGCCCGCCATGCTGGCGGCG‑‑‑TGGGTTTCGCTGATCATGTCGCAGGCTTCGTTGGAGGCAGCGCCATCCACGCCGATCGAGACCGACATGCCTGCGGCCTCCATGGCAACGATATCTGC                                                     <  2:553908/150‑1                                                                                                                                                       GGCG‑‑‑TGGGTTTCGCTGATCATGTCGCAGGCTTCGTTGGAGGCAGCGCCATCCACGCCGATCGAGACCGACATGCCTGCGGCCTCCATGGCAACGATATCTGCGATACCACTGCCAAGCCGGCCATTGCTTTGTGGGCAGTGGGCGATGCC     <  1:941346/150‑1                                                                                                                                                        GCG‑‑‑TGGGTTTCGCTGATCATGTCGCAGGCTTCGTTGGAGGCAGCGCCATCCACGCCGATCGAGACCGACATGCCTGCGGCCTCCATGGCAACGATATCTGCGATACCACTGCCAAGCCGGCCATTGCTTTGTGGGCAGTGGGCGATGCCG    <  1:1327/150‑1                                                                                                                                                          G‑‑‑TGGGTTTCGCTGATCATGTCGCAGGCTTCGTTGGAGGCAGCGCCATCCACGCCGATCGAGACCGACATGCCTGCGGCCTCCATGGCAACGATATCTGCGATACCACTGCCAAGCCGGCCATTGCTTTGTGGGCAGTGGGCGATGCCGGT  <  1:36654/150‑1                                                                                                                                                                                                                                                                                                                    GTTGCCATGGAGGCCGCAGGCATGTCGGTCTCGATCGGCGTGGATGGCGCTGCCTCCAACGAAGCCTGCGACATGATCAGCGAAACCCACGCCGCCTGGCTAATGCAAAGGGCCAAGGCTGGCGAACGCGCCATGGCCCGCCATGCTGGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3642314‑3642161 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggcg‑‑‑TGGGTTTCGCTGATCATGTCGCAGGCTTCGTTGGAGGCAGCGCCATCCACGCCGATCGAGACCGACATGCCTGCGGCCTCCATGGCAACGATATCTGCGATACCACTGCCAAGCCGGCCATTGCTTTGTGGGCAGTGGGCGATGCCGGT  >  NC_002947/3642226‑3642374

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.