New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3761742 | 67 (1.270) | 6 (0.120) | 7/232 | NT | 8.4% | coding (1047/2091 nt) | PP_3325 | ferric siderophore receptor |
? | NC_002947 | = 3761766 | 68 (1.370) | coding (1071/2091 nt) | PP_3325 | ferric siderophore receptor |
GTGCTCAACGACAACTGGAAGCTGCGCCTGGCCAACCACTACACCCAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3761590‑3761742 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacccagCTCGAACTGCCCGTGCAGCTCGGCCTGGGTGATGTTGTCGTTCCATTCGAAGTCGCGTTCGCGATAGAAGCGCGTGATGGTGGTGCTCACCAGGGCCTGGGGCTCGGAGCTGTTGCCCTTGAGCGTGCCCTGGGTGTAGTGGTTGGC < NC_002947/3761766‑3761620 GTGCTCAACGACAACTGGAAGCTGCGCCTGGCCAACCACTACACCCAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGAGAACGCGACTTCGAATGGAACGACAACATCACC > 1:668753/1‑150 GCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACC < 1:1211300/97‑1 GCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACC > 2:1211300/1‑97 TCCGAGCCCCAGGCCTTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGAGAACATCACCCAGCTCGAACTGCCCGTGCAGCTCGGCCTGG < 1:1357850/112‑1 TCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGCTCGAACTGCCCGTGCAGCTCGGCCTGG > 2:1357850/1‑112 GAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGCTCGAACTGCCCGTGCAGCTCG < 1:1386973/86‑1 GAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGCTCGAACTGCCCGTGCAGCTCG > 2:1386973/1‑86 TCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGCTCGAACTGCCCGTGCAGCTCGGCCTGG > 1:125145/1‑81 TCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGCTCGAACTGCCCGTGCAGCTCGGCCTGG < 2:125145/81‑1 TCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGATGTTGTCGTTCCATTCGAAGTCGCGTTCGCGATAGAAGCGCGTGATGGTGGTGCTCACCAGGGCCTGGGGCTCGGAGCTGTTGCCCTTGAGCGTGCCCTGGGTGTAGTGG > 1:425336/1‑150 ACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGATGTTGTCGTTCCATTCGAAGTCGCGTTCGCGATAGAAGCGCGTGATGGTGGTGCTCACCAGGGCCTGGGGCTCGGAGCTGTTGCCCTTGAGCGTGCCCTGGGTGTAGTGGTT > 1:943597/1‑150 CCCAGCTCGAACTGCCCGTGCAGCTCGGCCTGGGTGATGTTGTCGTTCCATTCGAAGTCGCGTTCGCGATAGAAGCGCGTGATGGTGGTGCTCACCAGGGCCTGGTGCTCGGAGCTGTTGCCCTTGAGCGTGCCCTGGGTGTAGTGGTTG < 2:138693/150‑1 CCCAGCTCGAACTGCCCGTGCAGCTCGGCCTGGGTGATGTTGTCGTTCCATTCGAAGTCGCGTTCGCGATAGAAGCGCGTGATGGTGGTGCTCACCAGGGCCTGGGGCTCGGAGCTGTTGCCCTTGAGCGTGCCCTGGGTGTAGTGGTTG < 1:837916/150‑1 CCCAGCTCGAACTGCCCGTGCAGCTCGGCCTGGGTGATGTTGTCGTTCCATTCGAAGTCGCGTTCGCGATAGAAGCGCGTGATGGTGGTGCTCACCAGGGCCTGGGGCTCGGAGCTGTTGCCCTTGAGCGTGCCCTGGGTGTAGTGGTTG < 1:650088/150‑1 CCCAGCTCGAACTGCCCGTGCAGCTCGGCCTGGGTGATGTTGTCGTTCCATTCGAAGTCGCGTTCGCGATAGAAGCGCGTGATGGTGGTGCTCACCAGGGCCTGGGGCTCGGAGCTGTTGCCCTTGAGCGTGCCCTGGGTGTAGTGGTTG < 2:994467/150‑1 CCAGCTCGAACTGCCCGTGCAGCTCGGCCTGGGTGATGTTGTCGTTCCATTCGAAGTCGCGTTCGCGATAGAAGCGCGTGATGGTGGTGCTCACCAGGGCCTGGGGCTCGGAGCTGTTGCCCTTGAGCGTGCCCTGGGTGTAGTGG < 1:756411/146‑1 CCAGCTCGAACTGCCCGTGCAGCTCGGCCTGGGTGATGTTGTCGTTCCATTCGAAGTCGCGTTCGCGATAGAAGCGCGTGATGGTGGTGCTCACCAGGGCCTGGGGCTCGGAGCTGTTGCCCTTGAGCGTGCCCTGGGTGTAGTGG > 2:756411/1‑146 CAGCTCGAACTGCCCGTGCAGCTCGGCCTGGGTGATGTTGTCGTTCCATTCGAAGTCGCGTTCGCGATAGAAGCGCGTGATGGTGGTGCTCACCAGGGCCTGGGGCTCGGAGCTGTTGCCCTTGAGCGTGCCCTGGGTGTAGTGGTTGGC > 2:93811/1‑150 GTGCTCAACGACAACTGGAAGCTGCGCCTGGCCAACCACTACACCCAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3761590‑3761742 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacccagCTCGAACTGCCCGTGCAGCTCGGCCTGGGTGATGTTGTCGTTCCATTCGAAGTCGCGTTCGCGATAGAAGCGCGTGATGGTGGTGCTCACCAGGGCCTGGGGCTCGGAGCTGTTGCCCTTGAGCGTGCCCTGGGTGTAGTGGTTGGC < NC_002947/3761766‑3761620 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |