New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 376174267 (1.270)6 (0.120) 7/232 NT 8.4% coding (1047/2091 nt) PP_3325 ferric siderophore receptor
?NC_002947 = 3761766 68 (1.370)coding (1071/2091 nt) PP_3325 ferric siderophore receptor

GTGCTCAACGACAACTGGAAGCTGCGCCTGGCCAACCACTACACCCAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3761590‑3761742
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacccagCTCGAACTGCCCGTGCAGCTCGGCCTGGGTGATGTTGTCGTTCCATTCGAAGTCGCGTTCGCGATAGAAGCGCGTGATGGTGGTGCTCACCAGGGCCTGGGGCTCGGAGCTGTTGCCCTTGAGCGTGCCCTGGGTGTAGTGGTTGGC  <  NC_002947/3761766‑3761620
                                                                                                                                                                                                                                                                                                            
GTGCTCAACGACAACTGGAAGCTGCGCCTGGCCAACCACTACACCCAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGAGAACGCGACTTCGAATGGAACGACAACATCACC                                                                                                                                                        >  1:668753/1‑150
                                                     GCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACC                                                                                                                                                        <  1:1211300/97‑1
                                                     GCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACC                                                                                                                                                        >  2:1211300/1‑97
                                                                     TCCGAGCCCCAGGCCTTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGAGAACATCACCCAGCTCGAACTGCCCGTGCAGCTCGGCCTGG                                                                                                                         <  1:1357850/112‑1
                                                                     TCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGCTCGAACTGCCCGTGCAGCTCGGCCTGG                                                                                                                         >  2:1357850/1‑112
                                                                                         GAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGCTCGAACTGCCCGTGCAGCTCG                                                                                                                               <  1:1386973/86‑1
                                                                                         GAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGCTCGAACTGCCCGTGCAGCTCG                                                                                                                               >  2:1386973/1‑86
                                                                                                    TCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGCTCGAACTGCCCGTGCAGCTCGGCCTGG                                                                                                                         >  1:125145/1‑81
                                                                                                    TCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAGCTCGAACTGCCCGTGCAGCTCGGCCTGG                                                                                                                         <  2:125145/81‑1
                                                                                                                                                 TCACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGATGTTGTCGTTCCATTCGAAGTCGCGTTCGCGATAGAAGCGCGTGATGGTGGTGCTCACCAGGGCCTGGGGCTCGGAGCTGTTGCCCTTGAGCGTGCCCTGGGTGTAGTGG       >  1:425336/1‑150
                                                                                                                                                   ACCCAGGCCGAGCTGCACGGGCAGTTCGAGCTGGGTGATGTTGTCGTTCCATTCGAAGTCGCGTTCGCGATAGAAGCGCGTGATGGTGGTGCTCACCAGGGCCTGGGGCTCGGAGCTGTTGCCCTTGAGCGTGCCCTGGGTGTAGTGGTT     >  1:943597/1‑150
                                                                                                                                                    CCCAGCTCGAACTGCCCGTGCAGCTCGGCCTGGGTGATGTTGTCGTTCCATTCGAAGTCGCGTTCGCGATAGAAGCGCGTGATGGTGGTGCTCACCAGGGCCTGGTGCTCGGAGCTGTTGCCCTTGAGCGTGCCCTGGGTGTAGTGGTTG    <  2:138693/150‑1
                                                                                                                                                    CCCAGCTCGAACTGCCCGTGCAGCTCGGCCTGGGTGATGTTGTCGTTCCATTCGAAGTCGCGTTCGCGATAGAAGCGCGTGATGGTGGTGCTCACCAGGGCCTGGGGCTCGGAGCTGTTGCCCTTGAGCGTGCCCTGGGTGTAGTGGTTG    <  1:837916/150‑1
                                                                                                                                                    CCCAGCTCGAACTGCCCGTGCAGCTCGGCCTGGGTGATGTTGTCGTTCCATTCGAAGTCGCGTTCGCGATAGAAGCGCGTGATGGTGGTGCTCACCAGGGCCTGGGGCTCGGAGCTGTTGCCCTTGAGCGTGCCCTGGGTGTAGTGGTTG    <  1:650088/150‑1
                                                                                                                                                    CCCAGCTCGAACTGCCCGTGCAGCTCGGCCTGGGTGATGTTGTCGTTCCATTCGAAGTCGCGTTCGCGATAGAAGCGCGTGATGGTGGTGCTCACCAGGGCCTGGGGCTCGGAGCTGTTGCCCTTGAGCGTGCCCTGGGTGTAGTGGTTG    <  2:994467/150‑1
                                                                                                                                                     CCAGCTCGAACTGCCCGTGCAGCTCGGCCTGGGTGATGTTGTCGTTCCATTCGAAGTCGCGTTCGCGATAGAAGCGCGTGATGGTGGTGCTCACCAGGGCCTGGGGCTCGGAGCTGTTGCCCTTGAGCGTGCCCTGGGTGTAGTGG       <  1:756411/146‑1
                                                                                                                                                     CCAGCTCGAACTGCCCGTGCAGCTCGGCCTGGGTGATGTTGTCGTTCCATTCGAAGTCGCGTTCGCGATAGAAGCGCGTGATGGTGGTGCTCACCAGGGCCTGGGGCTCGGAGCTGTTGCCCTTGAGCGTGCCCTGGGTGTAGTGG       >  2:756411/1‑146
                                                                                                                                                      CAGCTCGAACTGCCCGTGCAGCTCGGCCTGGGTGATGTTGTCGTTCCATTCGAAGTCGCGTTCGCGATAGAAGCGCGTGATGGTGGTGCTCACCAGGGCCTGGGGCTCGGAGCTGTTGCCCTTGAGCGTGCCCTGGGTGTAGTGGTTGGC  >  2:93811/1‑150
                                                                                                                                                                                                                                                                                                            
GTGCTCAACGACAACTGGAAGCTGCGCCTGGCCAACCACTACACCCAGGGCACGCTCAAGGGCAACAGCTCCGAGCCCCAGGCCCTGGTGAGCACCACCATCACGCGCTTCTATCGCGAACGCGACTTCGAATGGAACGACAACATCACCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3761590‑3761742
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacccagCTCGAACTGCCCGTGCAGCTCGGCCTGGGTGATGTTGTCGTTCCATTCGAAGTCGCGTTCGCGATAGAAGCGCGTGATGGTGGTGCTCACCAGGGCCTGGGGCTCGGAGCTGTTGCCCTTGAGCGTGCCCTGGGTGTAGTGGTTGGC  <  NC_002947/3761766‑3761620

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.