New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3813651	62 (1.180)	4 (0.080)	4/230	NT	6.6%	coding (685/852 nt)	PP_3369	LysR family transcriptional regulator
	?	NC_002947	= 3813686	56 (1.140)					coding (720/852 nt)	PP_3369	LysR family transcriptional regulator

AACAGCAATGGCTCAACCTCCAGGCCGGCCAGCAGCCGTTCGCATTGCACAGCAATGACCTGCGCATCCAGGCCCAAGCCTGTGCCGGCGGCATCGGCATCGCCTGCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3813541‑3813651 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcctgcTTCTTTCAGACCGTGTTCCTGTGCCATGAACGCGGGCAGGCAGGCGATGCCGATGCCGCCGGCACAGGCTTGGGCCTGGATGCGCAGGTCATTGCTGTGCAATGCGAACGGCTGCTGGCCGGCCTGGAGGTTGAGCCATTGCTGTTGTG  <  NC_002947/3813686‑3813538                                                                                                                                                                                                                                                                      AACAGCAATGGCTCAACCTCCAGGCCGGCCAGCAGCCGTTCGCATTGCACAGCAATGACCTGCGCATCCAGGCCCAAGCCTGTGCCGGCGGCATCGGAATCGCCTGCCTGCTTCTTTCAGACCGTGTTCCTGTGCCATGAACGCGGGCAG                                                                                                                >  1:1146542/1‑150         TGGCTCAACCTCCAGGCCGGCCAGCAGCCGTTCGCATTGCACAGCAATGACCTGCGCATCCAGGCCCAAGCCTGTGCCGGCGGCATCGGCATCGCCTGCCTGCTTCTTTCAGACCGTGTTCCTGTGCCATGAACGCGGGCAGGCAGGCGA                                                                                                        <  2:1146542/150‑1             TCAACCTCCAGGCCGGCCAGCAGCCGTTCGCATTGCACAGCAATGACCTGCGCATCCAGGCCCAAGCCTGTGCCGGCGGCATCGGCATCGCCTGCCTGCTTCTTTCAGACCGTGTTCCTGTGCCATGAACGCGGGCAGGCAG                                                                                                            >  1:404971/1‑142             TCAACCTCCAGGCCGGCCAGCAGCCGTTCGCATTGCACAGCAATGACCTGCGCATCCAGGCCCAAGCCTGTGCCGGCGGCATCGGCATCGCCTGCCTGCTTCTTTCAGACCGTGTTCCTGTGCCATGAACGCGGGCAGGCAG                                                                                                            <  2:404971/142‑1                                                                                                           CCTGCTTCTTTCAGACCGTGTTCCTGTGCCATGAACGCGGGCAGGCAGGCGATGCCGATGCCGCCGGCACAGGCTTGGGCCTGGATGCGCAGGTCATTGCTGTGCAATGCGAACGGCTGCTGGCCGGCCTGGAGGTTGAGCCATTGCTGT      >  1:626865/1‑150                                                                                                           CCTGCTTCTTTCAGACCGTGTTCCTGTGCCATGAACGCGGGCAGGCAGGCGATGCCGATGCCGCCGGCACAGGCTTGAGGGGGAATGCGCAGGTCATTGCTGTGCAATGCGCACGGCTGCTGGCCGGCCTGGAGGTTGAGCCATTGCTGT      >  1:1314660/1‑150                                                                                                            CTGCTTCTTTCAGACCGTGTTCCTGTGCCATGAACGCGGGCAGGCAGGCGATGCCGATGCCGCCGGCACAGGCTTGGGCCTGGATGCGCAGGTCATTGCTGTGCAATGCGAACGGCTGCTGGCCGGCCTGGAGGTTGAGCCATTGCTGTT     >  2:455081/1‑150                                                                                                              GCTTCTTTCAGACCGTGTTCCTGTGCCATGAACGCGGGCAGGCAGGCGATGCCGATGCCGCCGGCACAGGCTTGGGCCTGGATGCGCAGGTCATTGCTGTGCAATGCGAACGGCTGCTGGCCGGCCTGGAGGTTGAGCCATTGCTGTTGT   >  1:687592/1‑150                                                                                                               CTTCTTTCAGACCGTGTTCCTGTGCCATGAACGCGGGCAGGCAGGCGATGCCGATGCCGCCGGCACAGGCTTGGGCCTGGATGCGCAGGTCATTGCTGTGCAATGCGAACGGCTGCTGGCCGGCCTGGAGGTTGAGCCATTGCTGTTGTG  <  1:1264082/150‑1                                                                                                               CTTCTTTCAGACCGTGTTCCTGTGCCATGAACGCGGGCAGACAGGCGATGCCGATGCCGCCGGCACAGGCTTGGGCCTGGATGCGCAGGTCATTGCTGTGCAAAGCGAACGGCTGCTGGCCGGCCTGGAGGTTGAGCCATTGCTGTTGTG  >  1:700181/1‑150                                                                                                                                                                                                                                                                      AACAGCAATGGCTCAACCTCCAGGCCGGCCAGCAGCCGTTCGCATTGCACAGCAATGACCTGCGCATCCAGGCCCAAGCCTGTGCCGGCGGCATCGGCATCGCCTGCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3813541‑3813651 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcctgcTTCTTTCAGACCGTGTTCCTGTGCCATGAACGCGGGCAGGCAGGCGATGCCGATGCCGCCGGCACAGGCTTGGGCCTGGATGCGCAGGTCATTGCTGTGCAATGCGAACGGCTGCTGGCCGGCCTGGAGGTTGAGCCATTGCTGTTGTG  <  NC_002947/3813686‑3813538

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.