| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3859023 = | 46 (0.880) | 5 (0.100) | 5/232 | NT | 9.7% | coding (237/390 nt) | PP_3409 | cobalamin biosynthesis protein CobE |
| ? | NC_002947 | 3859062 = | 50 (1.010) | coding (276/390 nt) | PP_3409 | cobalamin biosynthesis protein CobE | |||||
CAGCAGGCCAGGGCGAGCGTCGCCGGGCCCAGTACCTGGCGCGTCAGCAGCAGCCTGGCCGTACCCTGCCGCTGGCTGGCCAGGGCCAGAGCCGCGCTTTCGGCTACGCCCCAGCAGCCACTGTGCCGGTGAGCAACGGCGGAACGGTGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3859175‑3859023‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggctgCTGGGGCGTAGCCGAAAGCGCGGCTCTGGCCCTGGCCAGCCAGCGGCAGGGTACGGCCAGGCTGCTGCTGACGCGCCAGGTACTGGGCCCGGCGACGCTCGCCCTGGCCTGCTGAGCGTTTCGCCCCCTCTTTCTTGCCAGGACTTTGC > NC_002947/3859062‑3859210 CAGCAGGCCAGGGCGAGCGCCGCCGGGCCCAGTACCTGGCGCGTCAGCAGCAGCCTGGCCGTACCCTGCCGCTGGCTGGCCAGGGCCAGAGCCGCGCTTTCGGCTACGCCCCAGCAGCCACTGTGCCGGTGAGCAACGGCGGAACGGTGG < 1:751768/150‑1 AGCAGGCCAGGGCGAGCGTCGCCGGGCCCAGTACCTGGCGCGTCAGCAGCAGCCTGGCCGTACCCTGCCGCTGGCTGGATAGGGACAAAGTTGCGCCATCGGCTATGCCCCAGCAGCCACTGTGCCGGTGAGCAACGGCGGAACGGTGGg > 1:168539/1‑149 CCAGCAGCCACTGTGCCGGTGAGCAACGGCGGAACGGTGGCTGCTGGGGCGTAGCCGAAAGCGCGGCTCTGGCCCTGGCCAGCCAGCGGCAGGGTACGGCCAGGCTGCTGCTGACGCGCCAGGTACTG > 1:1390546/1‑128 CCAGCAGCCACTGTGCCGGTGAGCAACGGCGGAACGGTGGCTGCTGGGGCGTAGCCGAAAGCGCGGCTCTGGCCCTGGCCAGCCAGCGGCAGGGTACGGCCAGGCTGCTGCTGACGCGCCAGGTACTG < 2:1390546/128‑1 TGTGCCGGTGAGCAACGGCGGAACGGTGGCTGCTGGGGCGTAGCCGAAAGCGCGGCTCTGGCCCTGGCCAGCCAGCGGCAGGGTACGGCCAGGCTGCTGC < 1:1147735/100‑1 TGTGCCGGTGAGCAACGGCGGAACGGTGGCTGCTGGGGCGTAGCCGAAAGCGCGGCTCTGGCCCTGGCCAGCCAGCGGCAGGGTACGGCCAGGCTGCTGC > 2:1147735/1‑100 TGCCGGTGAGCAACGGCGGAACGGTGGCTGCTGGGGCGTAGCCGAAAGCGCGGCTCTGGCCCTGGCCAGCCAGCGGCAGGGTACGGCCAGGCTGCTGCTGACGCGCCAGGTACTGGGCCCGGCGACGCTCGCCCTGGCCTGCTGAGCGTT > 1:868663/1‑150 GTGGCTGCTGGGGCGTAGCCGAAAGCGCGGCTCTGGCCCTGGCCAGCCAGCGGCAGGGTACGGCCAGGCTGCTGCTGACGCGCCAGGTACTGGGCCCGGCGACGCTCGCCCTGGCCTGCTGAGCGTTTCGCCCCCTCTTTCTTGCCAGGA > 1:1395278/1‑150 GTGGCTGCTGGGGCGTAGCCGAAAGCGCGGCTCTGGCCCTGGCCAGCCAGCGGCAGGGTACGGCCAGGCTGCTGCTGACGCGCCAGGTACTGGGCCCGGCGACGCTCGCCCTGGCCTGCTGAGCGTTTCGCCCCCTCTTTCTTGCCAGGA < 2:473567/150‑1 GCTGGGGCGTAGCCGAAAGCGCGGCTCTGGCCCTGGCCAGCCAGCGGCAGGGTACGGCCAGGCTGCTGCTGACGCGCCAGGTACTGGGCCCGGCGACGCTCGCCCTGGCCTGCTGAGCGTTTCGCCCCCTCTTTCTTGCCAGGACTTTGC < 2:11627/150‑1 GCTGGGGCGTAGCCGAAAGCGCGGCTCTGGCCCTGGCCAGCCAGCGGCAGGGTACGGCCAGGCTGCTGCTGACGCGCCAGGTACTGGGCCCGGCGACGCTCGCCCTGGCCTGCTGAGCGTTTCGCCCCCTCTTTCTTGCCAGGACTTTGC < 2:978411/150‑1 CAGCAGGCCAGGGCGAGCGTCGCCGGGCCCAGTACCTGGCGCGTCAGCAGCAGCCTGGCCGTACCCTGCCGCTGGCTGGCCAGGGCCAGAGCCGCGCTTTCGGCTACGCCCCAGCAGCCACTGTGCCGGTGAGCAACGGCGGAACGGTGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3859175‑3859023‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggctgCTGGGGCGTAGCCGAAAGCGCGGCTCTGGCCCTGGCCAGCCAGCGGCAGGGTACGGCCAGGCTGCTGCTGACGCGCCAGGTACTGGGCCCGGCGACGCTCGCCCTGGCCTGCTGAGCGTTTCGCCCCCTCTTTCTTGCCAGGACTTTGC > NC_002947/3859062‑3859210 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |