| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4131154 | 61 (1.160) | 6 (0.120) | 6/226 | NT | 9.4% | intergenic (+22/+90) | PP_3634/PP_3635 | GNAT family acetyltransferase/sulfonate ABC transporter permease |
| ? | NC_002947 | = 4131216 | 60 (1.240) | intergenic (+84/+28) | PP_3634/PP_3635 | GNAT family acetyltransferase/sulfonate ABC transporter permease | |||||
TGCAGATTCACACCTATCTGCTTAACCAGCAGGGTGAGGATGCAATGATCGAAGCGGAGCAGATGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCCTGTTCGCGGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4130996‑4131154‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggctCGCCCGCTCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGCGGGCAAGCCCGCGAACAGGCCATCGGATCAATGCACGTTCTTGCGCTGGCGCACACATTCCTGGGCTTGAGCGGTCAGCTCATCCAG < NC_002947/4131216‑4131073 TGCAGATTCACACCTATCTGCTTAACCAGCAGGGTGAGGATGCAATGATCGAAGCGGAGCAGATGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCCTGT < 2:390923/150‑1 GCAGATTCACACCTATCTGCTTAACCAGCAGGGTGAGGATGCAATGATCGAAGCGGAGCAGATGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCCTGTT > 2:458172/1‑150 ACACCTATCTGCTTAACCAGCAGGGTGAGGATGCAATGATCGAAGCGGAGCAGATGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCCTGTTCGCGGGCT > 1:605725/1‑150 CAGCAGGGTGAGGATGCAATGATCGAAGCGGAGCAGATGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCCTGTTCGCGGGCTCGCCCGCTCCCACAGGT > 1:1099153/1‑150 GATGCAATGATCGAAGCGGAGCAGATGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCCTGTTCGCGG > 1:609865/1‑118 GATGCAATGATCGAAGCGGAGCAGATGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCCTGTTCGCGG < 2:609865/118‑1 AGATGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCCTGTTCGCGGGCTCGCCCGCTCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGT < 2:1099153/150‑1 GCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCCTGTTCGCGGGCTCGCCCGCTCCCACAGGTACATCACCGGCCTTGGGTCTTACGGTATTCCTGTGGGCGC < 1:339044/150‑1 TGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCCTGTTC > 1:39635/1‑65 TGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCCTGTTC < 2:39635/65‑1 GACCGCTCAAGCCCAGGAATGTGTGCGCTAGCGCAAGAACGTGCATTGATCCGATGGCCTGTTCGCGGGCTCGCCCGCTCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGCGG > 1:970789/1‑130 GACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCCTGTTCGCGGGCTCGCCCGCTCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGCGG < 2:970789/130‑1 AGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCTTCTTCTCGGGCTCGCCCGCTCCCACAGGTACATCACCGGTCTTGTGCCTTACGGTATTCCTGTGGGCGCGGGCAAGCCCGCGAACAGGCCATCGGATCAATGCAC < 2:516464/150‑1 TCGCGGGCTCGCCCGCTCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGCGGGCAAGCCCGCGAACAGGCCATCGGATCAATGCACGTTCTTGCGCTGGCGCACACATTCCTGGGCTTGAGCGGTCAGCTCATC < 2:1126305/150‑1 CGGGCTCGCCCGCTCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGCGGGAAAGCCCGCGAACAGGCCATCGGATCAATGTCCGTTCTTGCGCTGGCGCACATATTCCTGGGCTTGAACGGTCAGCTCGTCCAG > 1:585170/1‑150 TGCAGATTCACACCTATCTGCTTAACCAGCAGGGTGAGGATGCAATGATCGAAGCGGAGCAGATGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCCTGTTCGCGGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4130996‑4131154‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggctCGCCCGCTCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGCGGGCAAGCCCGCGAACAGGCCATCGGATCAATGCACGTTCTTGCGCTGGCGCACACATTCCTGGGCTTGAGCGGTCAGCTCATCCAG < NC_002947/4131216‑4131073 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |