| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4261799 | 67 (1.270) | 6 (0.120) | 6/230 | NT | 8.5% | coding (1007/2460 nt) | PP_3734 | ABC transporter permease |
| ? | NC_002947 | = 4261808 | 66 (1.340) | coding (998/2460 nt) | PP_3734 | ABC transporter permease | |||||
TGCCGTTGCAACCATGGCCCCTGCGCCAGTCGCCAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4261643‑4261799‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccggcaCGTTGAGCCTGCCGGCGGGCTGGTGGCTGCTGGGTGTGCTGGTGAGTGTCCTCGGTGCATTGCTGGCCGGCTTGGAGAGTGTAATGCGCGCTGCCCGGTTGCCTTTGCTGGCGCTGGCGCAACCCCAGGCCTGGCGACTGGCGCAGGGG < NC_002947/4261808‑4261660 TGCCGTTGCAACCATGGCCCCTGCGCCAGTCGCCAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCC < 2:1386741/150‑1 GCAACCATGGCCCCTGCGCCAGTCGCCAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCA > 2:823177/1‑150 CCTGCGCCAGTCGCCAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCACGTTGAGCCTG < 1:105368/149‑1 CCTGCGCCAGTCGCCAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCACGTTGAGCCTG > 2:105368/1‑149 ACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCACGTTGAGCCTGC > 1:527307/1‑59 ACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCACGTTGAGCCTGC < 2:527307/59‑1 ACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGGGCTGGTGGCTGCTGGGTGTGCTGGTGAGTGTCCTCGGTGCATTGCTGGCCGGCTTG > 1:1111229/1‑89 ACCAGCCCGCCGGCAGGCTCAACGTGCCGGCGGGCTGGTGGCTGCTGGGTGTGCTGGTGAGTGTCCTCGGTGCATTGCTGGCCGGCTTG < 2:1111229/89‑1 GGCACGTTGAGCCTGCCGGCGGGCTGGTGGCTGCTGGGTGTGCTGGTGAGTGTCCTCGGTGCATTGCTGGCCGGCTTGGAGAGTGTAATGCGCGCTGCCCGGTTGCCTTTGCTGGCGCTGGCGCAACCCCAGGCCTGGCGACTGGCGCAG > 1:17782/1‑150 CACGTTGAGCCTGCCGGCGGGCTGGTGGCTGCTGGGTGTGCTGGTGAGTGTCCTCGGTGCATTGCTGGCCGGCTTGGAGAGTGTAATGCGCGCTGCCCGGTTGCCTTTGCTGGCGCTGGCGCAACCCCAGGCCTGGCGACTGGCGCAGGG < 2:1102094/150‑1 CACGTTGAGCCTGCCGGCGGGCTGGTGGCTGCTGGGTGTGCTGGTGAGTGTCCTCGGTGCATTGCTGGCCGGCTTGGAGAGTGTAATGCGCGCTGCCCGGTTGCCTTTGCTGGCGCTGGCGCAACCCCAGGCCTGGCGACTGGCGCAGGG < 2:1427256/150‑1 CACGTTGAGCCTGCCGGCGGGCTGGTGGCTGCTGGGTGTGCTGGTGAGTGTCCTCGGTGCATTGCTGGCCGGCTTGGAGAGTGTAA > 1:698632/1‑86 CACGTTGAGCCTGCCGGCGGGCTGGTGGCTGCTGGGTGTGCTGGTGAGTGTCCTCGGTGCATTGCTGGCCGGCTTGGAGAGTGTAA < 2:698632/86‑1 ACGTTGAGCCTGCCGGCGGGCTGGTGGCTGCTGGGTGTGCTGGTGAGTGTCCTCGGTGCATTGCTGGCCGGCTTGGAGAGTGTAATGCGCGCTGCCCGGTTGCCTTTGCTGGCGCTGGCGCAACCCCAGGCCTGGCGACTGGCGCAGGGG > 1:441478/1‑150 TGCCGTTGCAACCATGGCCCCTGCGCCAGTCGCCAGGCCTGGGGTTGCGCCAGCGCCAGCAAAGGCAACCGGGCAGCGCGCATTACACTCTCCAAGCCGGCCAGCAATGCACCGAGGACACTCACCAGCACACCCAGCAGCCACCAGCCCGCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4261643‑4261799‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccggcaCGTTGAGCCTGCCGGCGGGCTGGTGGCTGCTGGGTGTGCTGGTGAGTGTCCTCGGTGCATTGCTGGCCGGCTTGGAGAGTGTAATGCGCGCTGCCCGGTTGCCTTTGCTGGCGCTGGCGCAACCCCAGGCCTGGCGACTGGCGCAGGGG < NC_002947/4261808‑4261660 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |