| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4353677 = | 52 (0.990) | 4 (0.080) | 3/230 | NT | 6.9% | coding (759/1086 nt) | yrpB | 2‑nitropropane dioxygenase |
| ? | NC_002947 | 4353729 = | 60 (1.220) | coding (811/1086 nt) | yrpB | 2‑nitropropane dioxygenase | |||||
CAGCGGGAAGCGCGGTGCAAGCTCGCTCATCGGCCCCAGCTCGCGCATGAGGCGATTGTTGATGCCGCGCGCCGGGCGGCCGGTGAACAGGTTGGTCAGGGCGGTGTCGCTGGCAGGCGCGCTGTCCAGCGCCTGGCGATGCGCTGGCGACACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4353830‑4353677‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgacaccGCCCTGACCAACCTGTTCACCGGCCGCCCGGCGCGCGGCATCAACAATCGCCTCATGCGCGAGCTGGGGCCGATGAGCGAGCTTGCACCGCGCTTCCCGCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGATCCGCA > NC_002947/4353729‑4353874 CAGCGGGAAGCGCGGTGCAAGCTCGCTCATCGGCCCCAGCTCGCGCATGAGGCGATTGTTGATGCCGCGCGCCGGGCGGCCGGTGAACAGGTTGGTCAGGGCGGTGTCGCTGGCAGGCGCGCTGTCCAGCGCCTGGCGATGCGCTGGCGA < 1:76517/150‑1CAGCGGGAAGCGCGGTGCAAGCTCGCTCATCGGCCCCAGCTCGCGCATGAGGCGATTGTTGATGCCGCGCGCCGGGCGGCCGGTGAACAGGTTGGTCAGGGCGGTGTCGCTGGCAGGCGCGCTGTCCAGCGCCTGGCGATGCGCTGGCGA > 2:267699/1‑150 CGGGAAGCGCGGTGCAAGCTCGCTCATCGGCCCCAGCTCGCGCATGAGGCGATTGTTGATGCCGCGCGCCGGGCGGCCGGTGAACAGGTTGGTCAGGGCGGTGTCGCTGGCAGGCGCGCTGTCCAGCGCCTGGCGATGCGCTGGCGACAC < 1:1007074/150‑1 GGTGTCGCTGGCAGGCGCGCTGTCCAGCGCCTGGCGATGCGCTGGCGACACCGCCCTGACCAACCTGTTCACCGGCCGCCCGGCGCGCGGCATCAACAATCGCCTCATGCGCGAGCTGGGGCCGATGAGCGAGCTTGCACCGCGCTTCCC > 2:669320/1‑150 GGTGTCGCTGGCAGGCGCGCTGTCCAGCGCCTGGCGATCCGCTGGACCCACCGCCCTGACCAACCTGTTCACCGGCCGCCCGGCGCGCGGCATCAACAATCGCCTCATGCGCGAGCTGGGGCCGATGAGCGAGCTTGCACCGCGCTTCCC > 1:1097611/1‑150 TGTCGCTGGCAGGCGCGCTGTCCAGCGCCTGGCGATGCGCTGGCGACACCGCCCTGACCAACCTGTTCACCGGCCGCCCGGCGCGCGGCATCAACAATCGCCTCATGCGCGAGCTGGGGCCGATGAGCGAG < 1:705607/131‑1 TGTCGCTGGCAGGCGCGCTGTCCAGCGCCTGGCGATGCGCTGGCGACACCGCCCTGACCAACCTGTTCACCGGCCGCCCGGCGCGCGGCATCAACAATCGCCTCATGCGCGAGCTGGGGCCGATGAGCGAG > 2:705607/1‑131 CACCGCCCTGACCAACCTGTTCACCGGCCGCCCGGCGCGCGGCATCAACAATCGCCTCATGCGCGAGCTGGGGCCGATGAGCGAGCTTGCACCGCGCTTCCCGCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGATCCGCA < 1:1369593/150‑1 CAGCGGGAAGCGCGGTGCAAGCTCGCTCATCGGCCCCAGCTCGCGCATGAGGCGATTGTTGATGCCGCGCGCCGGGCGGCCGGTGAACAGGTTGGTCAGGGCGGTGTCGCTGGCAGGCGCGCTGTCCAGCGCCTGGCGATGCGCTGGCGACACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4353830‑4353677‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgacaccGCCCTGACCAACCTGTTCACCGGCCGCCCGGCGCGCGGCATCAACAATCGCCTCATGCGCGAGCTGGGGCCGATGAGCGAGCTTGCACCGCGCTTCCCGCTGGCGGGCGGGGCATTGATGCCTTTACGGGCGATCACCGATCCGCA > NC_002947/4353729‑4353874 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |