| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4353684 | 53 (1.010) | 3 (0.060) | 3/230 | NT | 5.2% | coding (766/1086 nt) | yrpB | 2‑nitropropane dioxygenase |
| ? | NC_002947 | = 4353720 | 60 (1.220) | coding (802/1086 nt) | yrpB | 2‑nitropropane dioxygenase | |||||
GCGCTCGTACCGCAGGTGGCCGATGCCGTCGGCGTGCCGGTGATTGCCGCCGGTGGTATCGGCGACCACCGCGGGCTGTTGGCGGCACTGGCCCTGGGTGCCTCGGCAGTGCAGATCGGCACGGCTTACCTGTTCTGCCCCGAGGCCAAGGTGTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4353528‑4353684‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgtcgcTGGCAGGCGCGCTGTCCAGCGCCTGGCGATGCGCTGGCGACACCTTGGCCTCGGGGCAGAACAGGTAAGCCGTGCCGATCTGCACTGCCGAGGCACCCAGGGCCAGTGCCGCCAACAGCCCGCGGTGGTCGCCGATACCACCGGCG < NC_002947/4353720‑4353575 GCGCTCGTACCGCAGGTGGCCGATGCCGTCGGCGTGCCGGTGATTGCCGCCGGTGGTATCGGCGACCACCGCGGGCTGTTGGCGGCACTGGCCCTGGGTGCCTCGGCAGTGCAGATCGGCACGGCTTACCTGTTCTGCCCCGAGGCCAAG > 1:500986/1‑150GCGCTCGTACCGCAGGTGGCCGATGCCGTCGGCGTGCCGGTGATTGCCGCCGGTGGTATCGGCGACCACCGCGGGCTGTTGGCGGCACTGGCCCTGGGTGCCTCGGCAGTGCAGATCGGCACGGCTTACCTGTTCTGCCCCGAGGCCAAG > 1:6996/1‑150GCGCTCGTACCGCAGGTGGCCGATGCCGTCGGCGTGCCGGTGATTGCCGCCGGTGGTATCGGCGACCACCGCGGGCTGTTGGCGGCACTGGCCCTGGGTGCCTCGGCAGTGCAGATCGGCACGGCTTACCTGTTCTGCCCCGAGGCCAAG > 2:1201844/1‑150GCGCTCGTACCGCAGGTGGCCGATGCCGTCGGCGTGCCGGTGATTGCCGCCGGTGGTATCGGCGACCACCGCGGGCTGTTGGCGGCACTGGCCCTGGGTGCCTCGGCAGTGCAGATCGGCACGGCTTACCTGTTCTGCCCCGAGGCCAAG > 2:449177/1‑150 CGCTCGTACCGCAGGTGGCCGATGCCGTCGGCGTGCCGGTGATTGCCCCCGGTGGTATCGGCGACCACCGCGGGCTGTTGGCGGCACTGGCCCTGGGTGCCTCGGCAGTGCAGATCGGCACGGCTTACCTGTTCTGCCCCGAGGCCAAGG < 1:154867/150‑1 GCTCGTACCGCAGGTGGCCGATGCCGTCGGCGTGCCGGTGATTGCCGCCGGTGGTATCGGCGACCACCGCGGGCTGTTGGCGGCACTGGCCCTGGGTGCCTCGGCAGTGCAGATCGGCACGGCGTACCTGTTCTGCCCCGAGGCCAAGGT > 2:1031720/1‑150 CGTACCGCAGGTGGCCGATGCCGTCGGCGTGCCGGTGATTGCCGCCGGTGGTATCGGCGACCACCGCGGGCTGTTGGCGGCACTGGCCCTGGGTGCCTCGGCAGCGTACTTTTTGGTGGCTTTCCTGTTCTGCCCCGAGGCCAAGGTGTC < 1:984430/150‑1 GCCGGTGGTATCGGCGACCACCGCGGGCTGTTGGCGGCACTGGCCCTGGGTGCCTCGGCAGTGCAGATCGGCACGGCTTACCTGTTCTGCCCCGAGGCCAAGGTGTCGCTGGCAGGCGCGCTGTCCAGCGCCTGGCGATGCGCTGGCGAC < 2:842153/150‑1 TCGGCAGTGCAGATCGGCACGGCTTACCTGTTCTGCCCCGAGGCCAAGGTGTCGCTGGCAGGCGCGCTGTCCAGCGCCTGGCGATGCGCTGGCGACACCTT < 1:1425522/101‑1 TCGGCAGTGCAGATCGGCACGGCTTACCTGTTCTGCCCCGAGGCCAAGGTGTCGCTGGCAGGCGCGCTGTCCAGCGCCTGGCGATGCGCTGGCGACACCTT > 2:1425522/1‑101 TCGCTGGCAGGCGCGCTGTCCAGCGCCTGGCGATGCGCTGGCGACACCTTGGCCTCGGGGCAGAACAGGTAAGCCGTGCCGATCTGCACTGCCGAGGCACCCAGGGCCAGTGCCGCCAACAGCCCGCGGTGGTCGCCGATACCACCGGCG > 1:825388/1‑150 GCGCTCGTACCGCAGGTGGCCGATGCCGTCGGCGTGCCGGTGATTGCCGCCGGTGGTATCGGCGACCACCGCGGGCTGTTGGCGGCACTGGCCCTGGGTGCCTCGGCAGTGCAGATCGGCACGGCTTACCTGTTCTGCCCCGAGGCCAAGGTGTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4353528‑4353684‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgtcgcTGGCAGGCGCGCTGTCCAGCGCCTGGCGATGCGCTGGCGACACCTTGGCCTCGGGGCAGAACAGGTAAGCCGTGCCGATCTGCACTGCCGAGGCACCCAGGGCCAGTGCCGCCAACAGCCCGCGGTGGTCGCCGATACCACCGGCG < NC_002947/4353720‑4353575 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |