New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 443821459 (1.120)4 (0.080) 4/234 NT 6.0% coding (1330/1425 nt) PP_3932 diguanylate cyclase
?NC_002947 = 4438272 69 (1.380)coding (1388/1425 nt) PP_3932 diguanylate cyclase

CTTGCGCCAGAGCGGGCCAACTTCACCGCCGAACGCCTGCGCCGCGCCATACAGGACCTGCACGTGACACAGGCCGACCAGCGCCTGCAGATTACCGTGAGTATCGGTGTGGCAGGCTGCGACGCAGACATGCCGGCCCCCAGCCTCGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4438064‑4438214
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgacgCGGTTGCGGCCCCGGGCCTTGGCCCGGTACAGCGCCTGGTCGGCACTGGCCAGCAGTTCGTCGAGGCTGGGGGCCGGCATGTCTGCGTCGCAGCCTGCCACACCGATACTCACGGTAATCTGCAGGCGCTGGTCGGCCTGTGTC  <  NC_002947/4438272‑4438129
                                                                                                                                                                                                                                                                                                       
CTTGCGCCAGAGCGGGCCAACTTCACCGCCGAACGCCTGCGCCGCGCCATACAGGACCTGCACGTGACACAGGCCGACCAGCGCCTGCAGATTACCGTGAGTATCGGTGTGGCAGGCTGCGACGCAGACATGCCGGCCCCCAGCCTCGAC                                                                                                                                                   >  1:650718/1‑150
       CAGAGCGGGCCAACTTCACCGCCGAACGCCTGCGCCGCGCCATACAGGACCTGCACGTGACACAGGCCGACCAGCGCCTGCAGATTACCGTGAGTATCGGTGTGGCAGGCTGCGACGCAGACATGCCGGCCCCCAGCCTCGACGCGGTTG                                                                                                                                            >  1:1202693/1‑150
                                                ATACAGGACCTGCACGTGACACAGGCCGACCAGCGCCTGCAGATTACCGTGAGTATCGGTGTGGCAGGCTGCGACGCAGACATGCCGGCCCCCAGCCTCGACGCGGTTGCGGCCCCGGGCCTTGGCCCGGTACAGCGCCTGGTCGGCACT                                                                                                   >  2:782784/1‑150
                                                               GTGACACAGGCCGACCAGCGCCTGCAGATTACCGTGAGTATCGGTGTGGCAGGCTGCGACGCAGACATGCCGGCCCCCAGCCTCGACGCGGTTGCGGCCCCGGGCCTTGGCCCGGTACAGCGCCTGGTCGGCACTGGCCAGCAGTTCGTC                                                                                    <  2:1202693/150‑1
                                                                 GACACAGGCCGACCAGCGCCTGCAGATTACCGTGAGTATCGGTGTGGCAGGCTGCGACGCAGACATGCCGGCCCCCAGCCTCGACGCGGTTGCGGCCCCGGGCCTTGGCCCGGTACAGCGCCTGGTCGGCACTGGCCAGCAGTTCGTCGA                                                                                  <  1:782784/150‑1
                                                                                                                                                 TCGACGCGGTTGCGGCCCCGGGCCTTGGCCCGGTACAGCGCCTGGTCGGCACTGGCCAGCAGTTCGTCGAGGCTGGGGGCCGGCATGTCTGCGTCGCAGCCTGCCACACCGATACTCACGGTAATCTGCAGGCGCTGGTCGGCCTGTGTC  <  1:1193581/150‑1
                                                                                                                                                                                                                                                                                                       
CTTGCGCCAGAGCGGGCCAACTTCACCGCCGAACGCCTGCGCCGCGCCATACAGGACCTGCACGTGACACAGGCCGACCAGCGCCTGCAGATTACCGTGAGTATCGGTGTGGCAGGCTGCGACGCAGACATGCCGGCCCCCAGCCTCGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4438064‑4438214
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgacgCGGTTGCGGCCCCGGGCCTTGGCCCGGTACAGCGCCTGGTCGGCACTGGCCAGCAGTTCGTCGAGGCTGGGGGCCGGCATGTCTGCGTCGCAGCCTGCCACACCGATACTCACGGTAATCTGCAGGCGCTGGTCGGCCTGTGTC  <  NC_002947/4438272‑4438129

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.