| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4504201 | 59 (1.120) | 6 (0.120) | 5/242 | NT | 9.0% | coding (309/393 nt) | tusD | sulfur transfer protein complex subunit TusD |
| ? | NC_002947 | = 4504225 | 63 (1.220) | coding (333/393 nt) | tusD | sulfur transfer protein complex subunit TusD | |||||
GCCCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGC‑‑CGTGAACCTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4504133‑4504201‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccCAGCCCCGACAGTTCCCAGGGCTTGGGCAGGTTCACGGCCGGTCGCTGGTAGCGGTTGGCCTCGGCTTCGTCGAGTACGCCACGGCGCAGGGCGGCGGCGATACACACCACGGCGTCCAGCTGATGGGTCTGTATGAAGGTGCGCCACT < NC_002947/4504225‑4504077 GCCCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCTCGTGCAGTTGGCCCAGCCCCGACAGTTCCCAGGGCTTGG < 1:546749/97‑1GCCCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGCCTCGTGCAGTTGGCCCAGCCCCGACAGTTCCCAGGGCTTGG > 2:546749/1‑97GCCCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGC‑‑CGTGAACCTGCCCCAGCCCCGACAGTTCCCAGGGCTTGGGCA < 1:797971/98‑1GCCCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGC‑‑CGTGAACCTGCCCCAGCCCCGACAGTTCCCAGGGCTTGGGCA > 2:797971/1‑98 TCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGC‑‑CGTGAACCTGCCCCAGCCCCGACAGTTCCCAGGGCTTGGGCAG > 1:1371857/1‑80 TCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGC‑‑CGTGAACCTGCCCCAGCCCCGACAGTTCCCAGGGCTTGGGCAG < 2:1371857/80‑1 CCAGCCCCGACAGTTCCCAGGGCTTGGGCAGGTTCACGGCCGGTCGCTGGTAGCGGTTGGCCTCGGCTTCGTCGAGTACGCCACGGCGCAGGGCGGCGGCGATACACACCACGGCGTCCAGCTGATGGGTCTGTATGAAGGTGCGCCACT < 1:1410442/150‑1 CCAGCCCCGACAGTTCCCAGGGCTTGGGCAGGTTCACGGCCGGTCGCTGGTAGCGGTTGGCCTCGGCTTCGTCGAGTACGCCACGGCGCAGGGCGGCGGCGATACACACCACGGCGTCCAGCTGATGGGTCTGTATGAAGGTGCGCCACT > 2:743529/1‑150 CCAGCCCCGACAGTTCCCAGGGCTTGGGCAGGTTCACGGCCGGTCGCTGGTAGCGGTTGGCCTCGGCTTCGTCGAGTACGCCACGGCGCAGGGCGGCGGCGATACACACCACGGCGTCCAGCTGATGGGTCTGTATGAAGGTGCGCCACT > 2:931044/1‑150 GCCCTGCGCCGTGGCGTACTCGACGAAGCCGAGGCCAACCGCTACCAGCGACCGGC‑‑CGTGAACCTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4504133‑4504201‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccCAGCCCCGACAGTTCCCAGGGCTTGGGCAGGTTCACGGCCGGTCGCTGGTAGCGGTTGGCCTCGGCTTCGTCGAGTACGCCACGGCGCAGGGCGGCGGCGATACACACCACGGCGTCCAGCTGATGGGTCTGTATGAAGGTGCGCCACT < NC_002947/4504225‑4504077 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |