New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4524512 =	73 (1.390)	16 (0.340)	9/218	NT	20.7%	intergenic (+91/‑102)	idh/PP_4013	isocitrate dehydrogenase/MutT/nudix family protein
	?	NC_002947	4524584 =	58 (1.250)					intergenic (+163/‑30)	idh/PP_4013	isocitrate dehydrogenase/MutT/nudix family protein

AGAGGAACTTGCCTTCGTGCTCGACGATGGTGGCGACGGTGATGTGGGGTTGCCAGGTCATGAACAGCTCCTTGAAGGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4524674‑4524512 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacccgctcctacaGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCTTCGTCGAGGAATTCAAAGCCAACCAGCACGTCTTCAACCAGCCTGCCGGCCACC  >  NC_002947/4524584‑4524728                                                                                                                                                                                                                                                                                                                      AGAGGAACTTGCCTTCGTGCTCGACGATGGTGGCGACGGTGATGTGGGGTTGCCAGGTCATGAACAGCTCCTTGAAGGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATAACGCATTCGCGGGTAA                                                                                                                                                                >  2:811073/1‑150  GAGGAACTTGCCTTCGTGCTCGACGATGGTGGCGACGGTGATGTGGGGTTGCCAGGTCATGAACAGCTCCTTGAAGGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAA                                                                                                                                                               >  2:1188789/1‑150   AGGAACTTGCCTTCGTGCTCGACGATGGTGGCGACGGTGATGTGGGGTTGCCAGGTCATGAACAGCTCCTTGAAGGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAAC                                                                                                                                                              >  1:914210/1‑150   AGGAACTTGCCTTCGTGCTCGACGATGGTGGCGACGGTGATGTGGGGTTGCCAGGTCATGAACAGCTCCTTGAAGGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAAC                                                                                                                                                              >  1:720955/1‑150    GGAACTTGCCTTCGTGCTCGACGATGGTGGCGACGGTGATGTGGGGTTGCCAGGTCATGAACAGCTCCTTGAAGGCGTGCATGTCCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACC                                                                                                                                                             <  2:479705/150‑1       ACTTGCCTTCGTGCTCGACGATGGTGGCGACGGTGATGTGGGGTTGCCAGGTCATGAACAGCTCCTTGAAGGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACGCGC                                                                                                                                                          >  2:883099/1‑150        CTTGCCTTCGTGCTCGACGATGGTGGCGACGGTGATGTGGGGTTGCCAGGTCATGAACAGCTCCTTGAAGGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCT                                                                                                                                                         >  2:821282/1‑150           GCCTTCGTGCTCGACGTGGGTGGCGACGGTGATGTGGGGTTGCCAGGTCATGAACAGCTCCTTGAAGGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCT                                                                                                                                                      >  1:760184/1‑150             CTTCGTGCTCGACGATGGTGGCGACGGTGATGTGGGGTTGCCAGGTCATGAACAGCTCCTTGAAGGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTAC                                                                                                                                                    >  1:1256245/1‑150             CTTCGTGCTCGACGATGGTGGCGACGGTGATGTGGGGTTGCCAGGTCATGAACAGCTCCTTGAAGGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTAC                                                                                                                                                    >  2:52858/1‑150                   GCTCGACGATGGTGGCGACGGTGATGTGTGGTTGCCAGGTCATGAACAGCTCCTTGAAGGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGC                                                                                                                                                          <  2:381280/138‑1                   GCTCGACGATGGTGGCGACGGTGATGTGTGGTTGCCAGGTCATGAACAGCTCCTTGAAGGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGC                                                                                                                                                          >  1:381280/1‑138                                   GACGGTGATGTCGGGTTGCCAGGTCATGAACAGCTCCTTGAAGGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGAACGCGCGATGGTGAGGCAAATGACGCACTCGCGGGTAAACCCGCTCCTACAAGGGTCATGCACGCCTTCAAG                                                                                                                              <  1:811073/150‑1                                                                                         CCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCAC                                                                        >  1:1117803/1‑150                                                                                              TAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGG                                                                   <  2:1117803/150‑1                                                                                                             CCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCC                                                           >  2:190877/1‑143                                                                                                             CCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCC                                                           <  1:190877/143‑1                                                                                                             CCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAA                                                                     >  2:880026/1‑133                                                                                                             CCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAA                                                                     <  1:880026/133‑1                                                                                                             CCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAA                                                                                                                               >  1:311103/1‑75                                                                                                             CCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTGAACCCGCTCCTACAGGGGTCATGCACGCCTTCAA                                                                                                                               <  2:311103/75‑1                                                                                                             CCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCTTCGT                                                    >  1:1164572/1‑150                                                                                                               GCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTC                                                                              >  2:1007434/1‑122                                                                                                               GCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTC                                                                              <  1:1007434/122‑1                                                                                                                 GAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCTTCGTCGAG                                                >  2:768138/1‑150                                                                                                                                         GCATTCGCGGGTAAACCCGCTCCTACAGGGGTCATGCAC                                                                                                                                       <  1:693318/39‑1                                                                                                                                         GCATTCGCGGGTAAACCCGCTCCTACAGGGGTCATGCAC                                                                                                                                       >  2:693318/1‑39                                                                                                                                             gaGCGGGTTCACCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCTTCGTCGAGGAATTCAAAGCCAACCAGCACGTCTTCA                    >  1:128616/3‑150                                                                                                                                                        CCCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGAACCCTCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCTTCGTCGAGGAATTCAAAGCCAACCAGCACGTCTTCAACCAGCCTGCC         >  1:260427/1‑150                                                                                                                                                         CCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCTTCGTCGAGGAATTCAAAGCCAACCAGCACGTCTTCAACCA                <  1:674666/142‑1                                                                                                                                                         CCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCTTCGTCGAGGAATTCAAAGCCAACCAGCACGTCTTCAACCA                >  2:674666/1‑142                                                                                                                                                         CCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCTTCGTCGA                                                 >  2:329107/1‑109                                                                                                                                                         CCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCTTCGTCGA                                                 <  1:329107/109‑1                                                                                                                                                         CCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTC                                                            <  2:366134/98‑1                                                                                                                                                         CCGCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTC                                                            >  1:366134/1‑98                                                                                                                                                           GCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCTTCGTCGAGGAATTCAAAGCCAAC                                 <  2:977829/123‑1                                                                                                                                                           GCTCCTACAGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCTTCGTCGAGGAATTCAAAGCCAAC                                 >  1:977829/1‑123                                                                                                                                                               CTACAGGGGTCATGCACGCCTTCAAGGAGATGTTCATGAACTGACAACGCCAAATTACGGTCGCCACCATCGTTGAGCACGAAGGAAAGTTCCTCTTCGTCGAGGAATTCAAAGACAACCAGCACGTCTTCAACCAGCCTGCCGGCCACC  >  1:249351/1‑150                                                                                                                                                                                                                                                                                                                      AGAGGAACTTGCCTTCGTGCTCGACGATGGTGGCGACGGTGATGTGGGGTTGCCAGGTCATGAACAGCTCCTTGAAGGCGTGCATGACCCCTGTAGGAGCGGGTTCACCCGCGAATGCGATGGTGAGGCAAATGACGCATTCGCGGGTAAACCCGCTCCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4524674‑4524512 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacccgctcctacaGGGGTCATGCACGCCTTCAAGGAGCTGTTCATGACCTGGCAACCCCACATCACCGTCGCCACCATCGTCGAGCACGAAGGCAAGTTCCTCTTCGTCGAGGAATTCAAAGCCAACCAGCACGTCTTCAACCAGCCTGCCGGCCACC  >  NC_002947/4524584‑4524728

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.