| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4545340 = | 52 (0.990) | 4 (0.080) | 6/226 | NT | 8.3% | coding (510/1284 nt) | hyuC | bifunctional N‑carbamoyl‑beta‑alanine amidohydrolase/allantoine amidohydrolase |
| ? | NC_002947 | 4545373 = | 41 (0.850) | coding (477/1284 nt) | hyuC | bifunctional N‑carbamoyl‑beta‑alanine amidohydrolase/allantoine amidohydrolase | |||||
CTCAACGACCTGGGCGTGGAAACCGAAGCGTCGCTCGAAGTGGTGGTGTGGACCAACGAAGAAGGTTCGCGTTTTGCGCCATGCATGATGGGGTCTGGGGTATTCGCCGGCAAGTTCACCCTGGAAGACACCCTGGCCAAGCGCG‑ATGCCCAGGGTGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4545498‑4545340‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagggtgtcTTCCAGGGTGAACTTGCCGGCGAATACCCCAGACCCCATCATGCATGGCGCAAAACGCGAACCTTCTTCGTTGGTCCACACCACCACTTCGAGCGACGCTTCGGTTTCCACGCCCAGGTCGTTGAGGGTGC > NC_002947/4545373‑4545503 CTCAACGACCTGGGCGTGGAAACCGAAGCGTCGCTCGAAGTGGTGGTGTGGACCAACGAAGAAGGTTCGCGTTTTGCGCCATGCATGATGGGGTCTGGGGTATTCGCCGGCAAGTTCACCCTGGAAGACACCCTGGCCAAGCGCG‑ATGCC > 1:734286/1‑150 CGACCTGGGCGTGGAAACCGAAGCGTAGCTCGAAGTGGTGGTGTGGACCAACGAAGAAGGTTCGCGTTTTGCGCCATGCATGATGGGGTCTGGGGTATTCGCCGGCAAGTTCACCCTGGAAGACACCCTGGCCAAGCGCG‑ATGCCCAGGG < 2:1008308/150‑1 GACCTGGGGGTAGAAACCGAAGCGTCGGGCGAAGTGGTGGTGTGGACCAACGAAGAAGGTTCGCGTTTTGCGCCATGCATGATGGGGTCTGGGGTATTCGCCGGCAAGTTCACCCTGGAAGACACCCTGGCCAAGCGCG‑ATGCCCAGGGT < 2:139348/150‑1 CGTGGAAACCGAAGCGTCGCTCGAAGTGGTGGTGTGGACCAACGAAGAAGGTTCGCGTTTTGCGCCATGCATGATGGGGTCTGGGGTATTCGCCGGCAAGTTCACCCTGGAAGACACCCTGGGC‑ATCGCGCTTGGCCAGGGTGTCTTCCA < 2:182926/150‑1 CAACGAAGAAGGTTCGCGTTTTGCGCCATGCATGATGGGGTCTGGGGTATTCGCCGGCAAGTTCACCCTGGAAGACACCCTGGGC‑ATCGCGCTTGGCCAGGGTGTCTTCCA < 1:476964/111‑1 CAACGAAGAAGGTTCGCGTTTTGCGCCATGCATGATGGGGTCTGGGGTATTCGCCGGCAAGTTCACCCTGGAAGACACCCTGGGC‑ATCGCGCTTGGCCAGGGTGTCTTCCA > 2:476964/1‑111 ATGCATGATGGGGTCTGGGGTATTCGCCGGCAAGTTCACCCTGGAAGACACCCTGGGC‑ATCGCGCTTGGCCAGGGTGTCTTCCAGGGTGAAC > 1:535795/1‑92 ATGCATGATGGGGTCTGGGGTATTCGCCGGCAAGTTCACCCTGGAAGACACCCTGGGC‑ATCGCGCTTGGCCAGGGTGTCTTCCAGGGTGAAC < 2:535795/92‑1 ACCCTGGCCAAGCGCG‑ATGCCCAGGGTGTCTTCCAGGGTGAACTTGCCGGCGAATACCCCAGACCCCATCATGCATGGCGCAAAACGCGAACCTTCTTCGTTGGTCCACACCACCACTTCGA < 1:69006/122‑1 ACCCTGGCCAAGCGCG‑ATGCCCAGGGTGTCTTCCAGGGTGAACTTGCCGGCGAATACCCCAGACCCCATCATGCATGGCGCAAAACGCGAACCTTCTTCGTTGGTCCACACCACCACTTCGA > 2:69006/1‑122 CAGGGTGTCTTCCAGGGTGAACTTGCCGGCGAATACCCCAGACCCCATCATGCATGGCGCAAAACGCGAACCTTCTTCGTTGGTCCACACCACCACTTCGAGCGACGCTTCGGTTTCCACGCCCAGGTCGTTGAGGGTGC < 1:418018/140‑1 CAGGGTGTCTTCCAGGGTGAACTTGCCGGCGAATACCCCAGACCCCATCATGCATGGCGCAAAACGCGAACCTTCTTCGTTGGTCCACACCACCACTTCGAGCGACGCTTCGGTTTCCACGCCCAGGTCGTTGAGGGTGC > 2:418018/1‑140 CTCAACGACCTGGGCGTGGAAACCGAAGCGTCGCTCGAAGTGGTGGTGTGGACCAACGAAGAAGGTTCGCGTTTTGCGCCATGCATGATGGGGTCTGGGGTATTCGCCGGCAAGTTCACCCTGGAAGACACCCTGGCCAAGCGCG‑ATGCCCAGGGTGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4545498‑4545340‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagggtgtcTTCCAGGGTGAACTTGCCGGCGAATACCCCAGACCCCATCATGCATGGCGCAAAACGCGAACCTTCTTCGTTGGTCCACACCACCACTTCGAGCGACGCTTCGGTTTCCACGCCCAGGTCGTTGAGGGTGC > NC_002947/4545373‑4545503 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |