| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4625552 | 43 (0.820) | 4 (0.080) | 3/230 | NT | 8.2% | intergenic (+4099/+465) | PP_5654/PP_4091 | phosphotriesterase/transposase |
| ? | NC_002947 | = 4625580 | 49 (1.000) | intergenic (+4127/+437) | PP_5654/PP_4091 | phosphotriesterase/transposase | |||||
GACTACCGCTACGACGCGGCCGACAATCTGCTGTCCATCACCTTCACAGACAACCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGCGAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4625396‑4625552‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgctggTCGGGCAGCACCAGGGTCTGCAAATTGCCCAGCGCGTCGTAGCGGTACTGCAGCAGGCCCGCGCTGTTGGTTTCGCTGAGCAGTTGCCCGTTGGGGTCGTAGGTGTAATCGAGTTGCTGCTTCTTGCCCTGGTTGTCTGTGAAGGTGA < NC_002947/4625580‑4625433 GACTACCGCTACGACGCGGCCGACAATCTGCTGTCCCCTTCCTTGACAGACAACCTGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGCGAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGAC < 2:1302300/150‑1GACTACCGCTACGACGCGGCCGACAATCTGCTGTCCATCACCTTCACAGACAACCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGCGAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGAC < 1:546439/150‑1 ACTAACGCTACGCCGCGGCCGACAATCTGCTGTCCATCACCTTCACAGACAACCAGGGCAAGAAGCAGCAACTCGATTACACCTACGCCCCCAACGGGCAACTGCTCAGCGAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACG > 2:235704/1‑150 CCGCTACGACGCGGCCGACAATCTGCTGTCCATCACCTTCACAGACAACCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGCGAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCT > 2:594529/1‑150 CCGCTACGACGCGGCCGACAATCTGCTGTCCATCACCTTCACAGACAACCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGCGAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCT > 1:729353/1‑150 CGCTACGACGCGGCCGACAATCTGCTGTCCGTCACCTTCACAGACAACCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGCGAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTG > 1:504345/1‑150 GCTACGACGCGGCCGACAATCTGCTGTCCATCACCTTCACAGACAACCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGCGAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGG < 2:78023/150‑1 GCTACGACGCGGCCGACAATCTGCTGTCCATCACCTTCACAGACAACCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGCGAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGG < 1:1285081/150‑1 CCTTCACAGACAACCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGCGAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGTCGGGCAGCACCAGGGTCTGCAAATTGCCCAGC < 1:594529/150‑1 CCTTCACAGACAACCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGCGAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGTCGGGCAGCACCAGGGTCTGCAAATTGCCCAGC < 1:48299/150‑1 GACAACCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGCGAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGTCGGGCAGCACCAGGGTCTGCAAATTGCCCAGCGCGTCGTA > 1:756571/1‑150 CCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGCGAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGGTCGGGCAGCACCAGGGTCTGCAAATTGCCCAGCGCGTCGTAGCGGT < 2:756571/150‑1 GAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGCGAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGG < 1:543680/95‑1 GAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGCGAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGG > 2:543680/1‑95 CTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGCGAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTG > 1:661691/1‑84 CTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGCGAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTG < 2:661691/84‑1 GGTCGGGCAGCACCAGGGTCTGCAAATTGCCCAGCGCGTCGTAGCGGTACTGCAGCAGGCCCGCGCTGTTGGTTTCGCTGAGCAGTTGCCCGTTGGGGTCGTAGGTGTAATCGAGTTGCTGCTTCTTGCCCTGGTTGTCTGTGAAGGTGA < 1:112125/150‑1 GACTACCGCTACGACGCGGCCGACAATCTGCTGTCCATCACCTTCACAGACAACCAGGGCAAGAAGCAGCAACTCGATTACACCTACGACCCCAACGGGCAACTGCTCAGCGAAACCAACAGCGCGGGCCTGCTGCAGTACCGCTACGACGCGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4625396‑4625552‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgctggTCGGGCAGCACCAGGGTCTGCAAATTGCCCAGCGCGTCGTAGCGGTACTGCAGCAGGCCCGCGCTGTTGGTTTCGCTGAGCAGTTGCCCGTTGGGGTCGTAGGTGTAATCGAGTTGCTGCTTCTTGCCCTGGTTGTCTGTGAAGGTGA < NC_002947/4625580‑4625433 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |