New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4755172 = | 60 (1.140) | 8 (0.160) | 7/228 | NT | 14.3% | coding (368/1965 nt) | pvdT | pyoverdine ABC transporter ATP‑binding protein/permease |
? | NC_002947 | 4755215 = | 40 (0.820) | coding (411/1965 nt) | pvdT | pyoverdine ABC transporter ATP‑binding protein/permease |
GCCGGTTGGTTCGTCGGCCAGGATGATGTGGCCACCGTTCATCAAGGCCCGGGCAATCGAGACCCGTTGCTGCTGGCCACCGGATAATTGATGCGGACGGTTGGCGGTGCGGCTGGCCAGGCCCAGGCGGCCGAGCAGGGCGCTGGCGCGGGCCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4755329‑4755172 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcctggcCAGCCGCACCGCCAACCGTCCGCATCAATTATCCGGTGGCCAGCAGCAACGGGTCTCGATTGCCCGGGCCTTGATGAACGGTGGCCACATCATCCTGGCCGACGAACCAACCGGCGCCCTCGACAGCCATAGCGGCGCCGAGGTGATG > NC_002947/4755215‑4755362 GCCGGTTGGTTCGTCGGCCAGGATGATGTGGCCACCGTTCATCAAGGCCCGGGCAATCGAGACCCGTTGCTGCTGGCCACCGGATAATTGATGCGGACGGTTGGCGGTGCGGCTGGCCAGGCCCAGGCGGCCGAGCAGGGCGCTGGCGCG > 2:151041/1‑150 CCGTTGCTGCTGGCCACCGGATAATTGATGCGGACGGTTGGCGGTGCGGCTGGCCAGGCCCAGGCGGCCGAGCAGGGCGCTGGCGCGGGCCTG > 1:350299/1‑93 CCGTTGCTGCTGGCCACCGGATAATTGATGCGGACGGTTGGCGGTGCGGCTGGCCAGGCCCAGGCGGCCGAGCAGGGCGCTGGCGCGGGCCTG < 2:350299/93‑1 CAGGCCCAGGCGGCCGAGCAGGGCGCTGGCGCGGGCCTGGCCAGCCGCACCGCCAACCGTCCGCATCAATTATCCGGTGGCCAGCAGCAACGGGTCTCGATTGCCCGGGCCTTGATGAACGGTGGCCACATCATCCTGGCC < 1:837661/141‑1 CAGGCCCAGGCGGCCGAGCAGGGCGCTGGCGCGGGCCTGGCCAGCCGCACCGCCAACCGTCCGCATCAATTATCCGGTGGCCAGCAGCAACGGGTCTCGATTGCCCGGGCCTTGATGAACGGTGGCCACATCATCCTGGCC > 2:837661/1‑141 CAGGCCCAGGCGGCCGAGCAGGGCGCTGGCGCGGGCCTGGCCAGCCGCACCGCCAACCGTCCGCATCAATTATCCGGTGGCCAGCAGCAACGGGTCTCGATTGCCCGGGCCTT < 1:196413/113‑1 CAGGCCCAGGCGGCCGAGCAGGGCGCTGGCGCGGGCCTGGCCAGCCGCACCGCCAACCGTCCGCATCAATTATCCGGTGGCCAGCAGCAACGGGTCTCGATTGCCCGGGCCTT > 2:196413/1‑113 CCAGGCGGCCGAGCAGGGCGCT‑‑‑‑‑GGGCCTGGCCAGCCGCACCGCCAACCGTCCGCATCAATTATCCGGTGGCCAGCAGCAACGGGTCTCGATTGCCCG < 1:38806/97‑1 CCAGGCGGCCGAGCAGGGCGCT‑‑‑‑‑GGGCCTGGCCAGCCGCACCGCCAACCGTCCGCATCAATTATCCGGTGGCCAGCAGCAACGGGTCTCGATTGCCCG > 2:38806/1‑97 CAGGCGGCCGAGCAGGGCGCTGGCGCGGGCCTGGCCAGCCGCACCGCCAACCGTCCGCATCAATTA < 1:26047/66‑1 CAGGCGGCCGAGCAGGGCGCTGGCGCGGGCCTGGCCAGCCGCACCGCCAACCGTCCGCATCAATTA > 2:26047/1‑66 GCCTGGCCAGCCGCACCGCCAACCGTCCGCATCAATTATCAGGTGGCCAGCAGCAACGGGTCTCGATTGCCCGGGCCTTGATGAACGGTGGCCACATCATCCTGGCCGACGAACCAACCGGCGCCCTCGACAGCCATAGCGGCGCCGAGG > 1:1363367/1‑150 CCTGGCCAGCCGCACCGCCAACCGTCCGCATCAATTATCCGGTGGCCAGCAGCAACGGGTCTCGATTGCCCGGGCCTTGATGAACGGTGGCCACATCATCCTGGCCGACGAACCAACCGGCGCCCTCGACAGCCATAGCGGCGCCGA < 1:1034840/147‑1 CCTGGCCAGCCGCACCGCCAACCGTCCGCATCAATTATCCGGTGGCCAGCAGCAACGGGTCTCGATTGCCCGGGCCTTGATGAACGGTGGCCACATCATCCTGGCCGACGAACCAACCGGCGCCCTCGACAGCCATAGCGGCGCCGA > 2:1034840/1‑147 GCCAGCCGCACCGCCAACCGTCCGCATCAATTATCCGGTGGCCAGCAGCAACGGGTCTCGATTGCCCGGGCCTTGATGAACGGTGGCCACATCATCCTGGCCGACGAACCAACCGGCGCCCTCGACAGCCATAGCGGCGCCGAGGTGATG > 2:594254/1‑150 GCCGGTTGGTTCGTCGGCCAGGATGATGTGGCCACCGTTCATCAAGGCCCGGGCAATCGAGACCCGTTGCTGCTGGCCACCGGATAATTGATGCGGACGGTTGGCGGTGCGGCTGGCCAGGCCCAGGCGGCCGAGCAGGGCGCTGGCGCGGGCCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4755329‑4755172 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcctggcCAGCCGCACCGCCAACCGTCCGCATCAATTATCCGGTGGCCAGCAGCAACGGGTCTCGATTGCCCGGGCCTTGATGAACGGTGGCCACATCATCCTGGCCGACGAACCAACCGGCGCCCTCGACAGCCATAGCGGCGCCGAGGTGATG > NC_002947/4755215‑4755362 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |