New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4773349 =	49 (0.930)	10 (0.200)	9/236	NT	18.0%	coding (5963/10413 nt)	pvdD	non‑ribosomal peptide synthetase
	?	NC_002947	4773394 =	44 (0.870)					coding (5918/10413 nt)	pvdD	non‑ribosomal peptide synthetase

TGGCGACCTGGCGCGCTATCGCCCGGACGGTGTGATCGATTACGCCGGGCGTATCGACCACCAGGTAAAAATTCGCGGCCTGCGTATCGAGCTGGGTGAGATCGAAGCACGACTGGCCGAGCACGCCCAAGTGCGCGAGGCAGTGGTGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4773498‑4773349 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgctTCGATCTCACCCAGCTCGATACGCAGGCCGCGAATTTTTACCTGGTGGTCGATACGCCCGGCGTAATCGATCACACCGTCCGGGCGATAGCGCGCCAGGTCGCCAGTGCGGTACAGACGACCGCCCTGCTCATCGAACGGATCGGG  >  NC_002947/4773394‑4773539                                                                                                                                                                                                                                                                                                          TGGCGACCTGGCGCGCTATCGCCCGGACGGTGTGATCGATTACGCCGGGCGTATCGACCACCAGGTAAAAATTCGCGGCCTGCGTATCGAGCTGGGTGAGATCGAAGCACGACTGGCCGAGCACGCCCAAGTGCGCGAGGCAGTGGTGCT                                                                                                                                                    >  1:1255346/1‑150                                                                                                        GAAGCACGACTGGCCGAGCACGCCCAAGTGCGCGAGGCAGTGGTGCTTCGATCTCACCCAGCTCGATACGCAGGCCGCGAATTTTTACCTGGTGGTCGATACGCCCGGCGTAATCGATCACACCGTCCGGGCGATAGCGCGCCAGGTCGC                                             >  2:285073/1‑150                                                                                                         AAGCACGACTGGCCGAGCACGCCCAAGTGCGCGAGGCAGTGGTGCTTCGATCTCACCCAGCTCGATACGCAGGCCACGAATTTTTACCTAGTGGTCGATACGCCCGGCGTAAACGATCACACCGTCCGGGCGATAGCGCGCCAGGTCGCC                                            >  1:1220495/1‑150                                                                                                          AGCACGACTGGCCGAGCACGCCCAAGTGCGCGAGGCAGTGGTGCTTCGATCTCACCCAGCTCGATACGCAGGCCGCGAATTTTTACCTGGTGGTCGATACGCCCGGCGTAATCGATCACACCGTCCGGGCGATAGCGCGCCAGGTCGCCA                                           >  1:1306549/1‑150                                                                                                          AGCACGACTGGCCGAGCACGCCCAAGTGCGCGAGGCAGTGGTGCTTCGATCTCACCCAGCTCGATACGCAGGCCGCGAATTTTTACCTGGT                                                                                                      >  1:1063045/1‑91                                                                                                          AGCACGACTGGCCGAGCACGCCCAAGTGCGCGAGGCAGTGGTGCTTCGATCTCACCCAGCTCGATACGCAGGCCGCGAATTTTTACCTGGT                                                                                                      <  2:1063045/91‑1                                                                                                            CACGACTGGCCGAGTACGCCCAAGTGCGCGAGGCAGTGGTGCTTCGATCTCACCCAGCTCGATACGCAGGCCGCGAATTTTTACCTGGTGGTCGAT                                                                                               >  1:334305/1‑96                                                                                                            CACGACTGGCCGAGTACGCCCAAGTGCGCGAGGCAGTGGTGCTTCGATCTCACCCAGCTCGATACGCAGGCCGCGAATTTTTACCTGGTGGTCGAT                                                                                               <  2:334305/96‑1                                                                                                             ACGACTGGCCGAGCACGCCCAAGTGCGCGAGGCAGTGGTGCTTCGATCTCACCCAGCTCGATACGCAGGCCGCGAATTTTTACCTGGTGGTCGATACGCCCGGCGTAATCGATCACACCGTCCGGGCGATAGCGCGCCAGGTCGCCAGTG                                        <  1:285073/150‑1                                                                                                             ACGACTGGCCGAGCACGCCCAAGTGCGCGAGGCAGTGGTGCTTCGATCTCACCCAGCTCGATACGCAGGCCGCGAATTTTTACCTGGTGGTCGATACGCCCGGCGTAATCGATCACACCGTCCGGGCGATAGCGCGCCAGGTCGCCAGTG                                        >  2:186114/1‑150                                                                                                                    GCCGAGCACGCCCAAGTGCGCGAGGCAGTGGTGCTTCGATCTCACCCAGCTCGATACGCAGGCCGCGAATTTTTACCTGGTGGTCGATACGCCCGGCGTAATCGATCACACCGTCCGGGCGATAGCGCGCCAGGTCGCCAGTGCGGTACA                                 <  2:1306549/150‑1                                                                                                                                                  GTGCTTCGATCTCACCCAGCTCGATACGCAGGCCGCGAATTTTTACCTGGTGGTCGATACGCCCGGCGTAATCGATCACACCGTCCGGGCGATAGCGCGCCAGGAAGCCAATGCGGTCCAGAGGACCGCCCTGCCCATCGAACGGAgcag   >  1:81304/1‑146                                                                                                                                                   TGCTTCGATCTCACCCAGCTCGATACGCAGGCCGCGAATTTTTACCTGGTGGTCGATACGCCCGGCGTAATCGATCACACCGTCCGGGCGATAGCGCGCCAGGTCGCCAGTGCGGTACAGACGACCGCCCTGCTCATCGAACGGATCGGG  >  2:278458/1‑150                                                                                                                                                                                                                                                                                                          TGGCGACCTGGCGCGCTATCGCCCGGACGGTGTGATCGATTACGCCGGGCGTATCGACCACCAGGTAAAAATTCGCGGCCTGCGTATCGAGCTGGGTGAGATCGAAGCACGACTGGCCGAGCACGCCCAAGTGCGCGAGGCAGTGGTGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4773498‑4773349 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgctTCGATCTCACCCAGCTCGATACGCAGGCCGCGAATTTTTACCTGGTGGTCGATACGCCCGGCGTAATCGATCACACCGTCCGGGCGATAGCGCGCCAGGTCGCCAGTGCGGTACAGACGACCGCCCTGCTCATCGAACGGATCGGG  >  NC_002947/4773394‑4773539

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.