| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4847336 | 56 (1.070) | 6 (0.120) | 4/238 | NT | 9.7% | coding (2041/2475 nt) | PP_4261 | cation‑transporting P‑type ATPase |
| ? | NC_002947 | = 4847357 | 57 (1.120) | coding (2062/2475 nt) | PP_4261 | cation‑transporting P‑type ATPase | |||||
ATGCCCCGGCCCTGCTCGCTGCCTGCAAGGCGCGGGGCTGGCACACCCTGCTGCTGTCGGGCGACAGCTCGCCGATGGTTGCCGAAGTGGCCGCGCAGCTGGGTATCGACCAGGCCATTGGCGGCCTGCGCCCGGATGACAAACTGGACCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4847184‑4847336‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccCGTCAGCCTGCAGGGCTTTCAGGCGGTCCAGTTTGTCATCCGGGCGCAGGCCGCCAATGGCCTGGTCGATACCCAGCTGCGCGGCCACTTCGGCAACCATCGGCGAGCTGTCGCCCGACAGCAGCAGGGTGTGCCAGCCCCGCGCCTTG < NC_002947/4847357‑4847209 ATGCCCCGGCCCTGCTCGCTGCCTGCAAGGCGCGGGGCTGGCACACCCTGCTGCTGTCGGGCGACAGCTCGCCGATGGTTGCCGAAGTGGCCGCGCAGCTGGGTATCGACCAGGCCATTGGCGGCCTGCGCCCGGATGACAAACTGGACC > 2:686799/1‑150 AGGCGCGGGGCTGGCACACCCTGCTGCTGTCGGGCGACAGCTCGCCGATGGTTGCCGAAGTGGCCGCGCAGCTGGGTATCGACCAGGCCATTGGCGGCCTGCGCCCGGATGACAAACTGGACCGCCCGTCAGCCTGCAGGGCTTTCAGGC > 2:489945/1‑150 CTGGCACACCCTGCTGCTGTCGGGCGACAGCTCGCCGATGGTTGCCGAAGTGGCCGCGCAGCTGGGTATCGACCAGGCCATTGGCGGCCTGCGCCCGGATGACAAACTGGACCGCCCGTCAGCCTGCAGGGCTTTCAGGCGGTCCAGTTT < 1:489945/150‑1 GCCGATGGTTGCCGAAGTGGCCGCGCAGCTGGGTATCGACCAGGCCATTGGCGGCCTGCGCCCGGATGACAAACTGGACCGCCCGTCAGCCTGCAGGGCTTTCAGGCGG > 1:274477/1‑109 GCCGATGGTTGCCGAAGTGGCCGCGCAGCTGGGTATCGACCAGGCCATTGGCGGCCTGCGCCCGGATGACAAACTGGACCGCCCGTCAGCCTGCAGGGCTTTCAGGCGG > 1:274811/1‑109 GCCGATGGTTGCCGAAGTGGCCGCGCAGCTGGGTATCGACCAGGCCATTGGCGGCCTGCGCCCGGATGACAAACTGGACCGCCCGTCAGCCTGCAGGGCTTTCAGGCGG < 2:274477/109‑1 GCCGATGGTTGCCGAAGTGGCCGCGCAGCTGGGTATCGACCAGGCCATTGGCGGCCTGCGCCCGGATGACAAACTGGACCGCCCGTCAGCCTGCAGGGCTTTCAGGCGG < 2:274811/109‑1 CCGTCAGCCTGCAGGGCTTTCAGGCGGTCCAGTTTGTCATCCGGGCGCAGGCCGCCAATGGCCTGGTCGATACCCAGCTGCGCGGCCACTTCGGCAACCATCGGCGAGCTGTCGCCCGACAGCAGCAGGGTGTGCCAGCCCCGCGCCTTG > 1:1034756/1‑150 ATGCCCCGGCCCTGCTCGCTGCCTGCAAGGCGCGGGGCTGGCACACCCTGCTGCTGTCGGGCGACAGCTCGCCGATGGTTGCCGAAGTGGCCGCGCAGCTGGGTATCGACCAGGCCATTGGCGGCCTGCGCCCGGATGACAAACTGGACCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4847184‑4847336‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccCGTCAGCCTGCAGGGCTTTCAGGCGGTCCAGTTTGTCATCCGGGCGCAGGCCGCCAATGGCCTGGTCGATACCCAGCTGCGCGGCCACTTCGGCAACCATCGGCGAGCTGTCGCCCGACAGCAGCAGGGTGTGCCAGCCCCGCGCCTTG < NC_002947/4847357‑4847209 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |