| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4853195 = | 71 (1.350) | 5 (0.100) | 5/238 | NT | 6.1% | coding (1951/2076 nt) | dnaX | DNA polymerase III subunit gamma |
| ? | NC_002947 | 4853224 = | 84 (1.650) | coding (1922/2076 nt) | dnaX | DNA polymerase III subunit gamma | |||||
CCAGGGGGCGCTGTTCAACGCCACCCAGCAGCGGCGCCTGAACGAAGCGCTCAACCAGCACCTGGGGCGCACGCTGAACCTGCGCATCGAGCTGATCCTGCCAGAGCAGGAAACCCCGGCTCAGGCGGCGGCACGCAAGCGAGCCGAGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4853346‑4853195‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccTGAGCCGGGGTTTCCTGCTCTGGCAGGATCAGCTCGATGCGCAGGTTCAGCGTGCGCCCCAGGTGCTGGTTGAGCGCTTCGTTCAGGCGCCGCTGCTGGGTGGCGTTGAACAGCG > NC_002947/4853224‑4853338 CCAGGGGGCGCTGTTCAACGCCACCCAGCAGCGGCGCCTGAACGAAGCGCTCAACCAGCACCTGGGGCGCACGCTGAACCTGCGCATCGAGCTGATCCTGCCAGAGCAGGAAACCCCGGCTCAGGCGGCGGCACGCAAGCGAGCCGAGCG > 2:1237908/1‑150 CCCGGCTCAGGCGGCGGCACGCAAGCGAGCCGAGCGCCTGAGCCGGGGTTTCCTGCTCTGGCAGGATCAGCTCGATGCGCAGGTTCAGCGTGCGCCCCAGGTGCTGGTTGAGCGCTTCGTTCAGGCGCCGCTGCTGGGTGGCGTTGAACA > 2:1240620/1‑150 CGGCTCAGGCGGCGGCACGCAAGCGAGCCGAGCGCCTGAGCCGGGGTTTCCTGCTCTGGCAGGATCAGCTCGATGCGCAGGTTCAGCGTGCGCCCCAGGTGCTGGTTGAGCGCTTCGTTCAGGCGCCGCTGCTGGGTGGCGTTGAACAGC < 1:1240620/150‑1 GGCTCAGGCGGCGGCACGCAAGCGAGCCGAGCGCCAGAGCCGGGGTTTCCTGCTCTGGCAGGATCAGCTCGATGCGCAGGTTCAGCGTGCGCCCCAGGTGCTGGTTGAGCGCTTCGTTCAGGCGCCGCTGCTGGGTGGCGTTGAACAGCG > 2:740903/1‑150 GCGGCGGCACGCAAGCGAGCCGAGCGCCTGAGCCGGGGTTTCCTGCTCTGGCAGGATCAGCTCGATGCGCAGGTTCAGCGTGCGCCCCAGGTGCTG < 1:688987/96‑1 GCGGCGGCACGCAAGCGAGCCGAGCGCCTGAGCCGGGGTTTCCTGCTCTGGCAGGATCAGCTCGATGCGCAGGTTCAGCGTGCGCCCCAGGTGCTG > 2:688987/1‑96 CCAGGGGGCGCTGTTCAACGCCACCCAGCAGCGGCGCCTGAACGAAGCGCTCAACCAGCACCTGGGGCGCACGCTGAACCTGCGCATCGAGCTGATCCTGCCAGAGCAGGAAACCCCGGCTCAGGCGGCGGCACGCAAGCGAGCCGAGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4853346‑4853195‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccTGAGCCGGGGTTTCCTGCTCTGGCAGGATCAGCTCGATGCGCAGGTTCAGCGTGCGCCCCAGGTGCTGGTTGAGCGCTTCGTTCAGGCGCCGCTGCTGGGTGGCGTTGAACAGCG > NC_002947/4853224‑4853338 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |